CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SELMODRAFT_26604
(
Selaginella moellendorffii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
SELMODRAFT_26604
T005146_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA
TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.678
0.780
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.678
0.780
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.678
0.780
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFJ11744
AP2
13
64
PLYRGIRRRSWGKWVSEIREPKKKTRIWLGSFPTPEMAARAYDVAAISLKGP
Links
Other
AP2
family TFs
Other
Selaginella moellendorffii
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SELMODRAFT_26594
Selaginella moellendorffii
SELMODRAFT_26594
I
0.811
SELMODRAFT_125385
Selaginella moellendorffii
SELMODRAFT_125385
I
0.740
SELMODRAFT_104978
Selaginella moellendorffii
SELMODRAFT_104978
I
0.740
Traes_6DL_901793D6D
Triticum aestivum
Traes_6DL_901793D6D
I
0.710
MLOC_75601
Hordeum vulgare
MLOC_75601
I
0.710
BRADI3G50620
Brachypodium distachyon
BRADI3G50620
I
0.708
SELMODRAFT_71659
Selaginella moellendorffii
SELMODRAFT_71659
I
0.708
SELMODRAFT_71661
Selaginella moellendorffii
SELMODRAFT_71661
I
0.708
OS02G0656600
Oryza sativa
OS02G0656600
I
0.706
ORGLA04G0178600
Oryza glaberrima
ORGLA04G0178600
I
0.706
OPUNC04G18500
Oryza punctata
OPUNC04G18500
I
0.706
ORGLA02G0228000
Oryza glaberrima
ORGLA02G0228000
I
0.706
OS04G0549700
Oryza sativa
OS04G0549700
I
0.706
ORUFI04G22400
Oryza rufipogon
ORUFI04G22400
I
0.706
Traes_2BL_593E1CCC2
Triticum aestivum
Traes_2BL_593E1CCC2
I
0.706
BGIOSGA016882
Oryza indica
BGIOSGA016882
I
0.706
Traes_2AL_45E6314EF
Triticum aestivum
Traes_2AL_45E6314EF
I
0.706
Pavir.Ga01095
Panicum virgatum
Pavir.Ga01095
I
0.706
Pavir.J17742
Panicum virgatum
Pavir.J17742
I
0.706
Sb06g024530
Sorghum bicolor
Sb06g024530
I
0.706
Si010703m.g
Setaria italica
Si010703m.g
I
0.706
OPUNC02G24210
Oryza punctata
OPUNC02G24210
I
0.706
OGLUM04G20750
Oryza glumaepatula
OGLUM04G20750
I
0.706
OGLUM02G27010
Oryza glumaepatula
OGLUM02G27010
I
0.706
ONIVA04G19040
Oryza nivara
ONIVA04G19040
I
0.706
OMERI02G25900
Oryza meridionalis
OMERI02G25900
I
0.706
OMERI04G17260
Oryza meridionalis
OMERI04G17260
I
0.706
ONIVA02G28960
Oryza nivara
ONIVA02G28960
I
0.706
GSMUA_Achr10G27680_001
Musa acuminata
GSMUA_Achr10G27680_001
I
0.703
Lus10001601.g
Linum usitatissimum
Lus10001601.g
I
0.691
Lus10002801.g
Linum usitatissimum
Lus10002801.g
I
0.691
Bo9g011210
Brassica oleracea
Bo9g011210
I
0.688
Bra036552
Brassica rapa
Bra036552
I
0.688
Thhalv10004870m.g
Eutrema salsugineum
Thhalv10004870m.g
I
0.688
Bo6g077080
Brassica oleracea
Bo6g077080
I
0.686
Lus10038270.g
Linum usitatissimum
Lus10038270.g
I
0.686
SELMODRAFT_73157
Selaginella moellendorffii
SELMODRAFT_73157
I
0.686
SELMODRAFT_73150
Selaginella moellendorffii
SELMODRAFT_73150
I
0.686
Bra003415
Brassica rapa
Bra003415
I
0.686
Solyc06g066540.1
Solanum lycopersicum
Solyc06g066540.1
I
0.684
Cla012859
Citrullus lanatus
Cla012859
I
0.683
Cucsa.038760
Cucumis sativus
Cucsa.038760
I
0.683
PGSC0003DMG400002620
Solanum tuberosum
PGSC0003DMG400002620
I
0.683
Lus10025834.g
Linum usitatissimum
Lus10025834.g
I
0.683
Solyc03g120840.1
Solanum lycopersicum
Solyc03g120840.1
I
0.682
Bra034535
Brassica rapa
Bra034535
I
0.681
Thhalv10026204m.g
Eutrema salsugineum
Thhalv10026204m.g
I
0.681
mgf022971m
Mimulus guttatus
mgf022971m
I
0.681
Bo7g115860
Brassica oleracea
Bo7g115860
I
0.681
Bra037041
Brassica rapa
Bra037041
I
0.681
Eucgr.F03062
Eucalyptus grandis
Eucgr.F03062
I
0.681
Bo3g171090
Brassica oleracea
Bo3g171090
I
0.681
TCM_028851
Theobroma cacao
TCM_028851
I
0.681
Gorai.009G050200
Gossypium raimondii
Gorai.009G050200
I
0.680
Solyc05g050830.1
Solanum lycopersicum
Solyc05g050830.1
I
0.679
PGSC0003DMG400007025
Solanum tuberosum
PGSC0003DMG400007025
I
0.679
ERF043
Arabidopsis thaliana
AT4G32800
D
0.678
scaffold_700899.1
Arabidopsis lyrata
scaffold_700899.1
I
0.678
Carubv10006567m.g
Capsella rubella
Carubv10006567m.g
I
0.678
Bostr.7867s1130
Boechera stricta
Bostr.7867s1130
I
0.678
Cagra.4093s0009
Capsella grandiflora
Cagra.4093s0009
I
0.678
Bra007539
Brassica rapa
Bra007539
I
0.677
Bo8g095240
Brassica oleracea
Bo8g095240
I
0.677
Thhalv10006200m.g
Eutrema salsugineum
Thhalv10006200m.g
I
0.677
SELMODRAFT_73147
Selaginella moellendorffii
SELMODRAFT_73147
N
0.677
30146.m003535
Ricinus communis
30146.m003535
I
0.677
SELMODRAFT_73148
Selaginella moellendorffii
SELMODRAFT_73148
N
0.677
AMTR_s00021p00223240
Amborella trichopoda
AMTR_s00021p00223240
I
0.677