SELMODRAFT_71661 (Selaginella moellendorffii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 SELMODRAFT_71661 T005191_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA

TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.698 0.780
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN

NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.698 0.780
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH

DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.698 0.780
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD

HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.692 0.780
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH

DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.692 0.780
ERF035
M06631_2.00
Arabidopsis thaliana
YCACCGACANWDNH

DNHWNTGTCGGTGR
Dap-seq
OMalley et al.(2016)
AT3G60490_col_a
0.684 0.760
ERF035
M06632_2.00
Arabidopsis thaliana
NNBCACCGACAHWNNN

NNNWDTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a
0.684 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ07906 AP2 3 54

Links

Other AP2 family TFs
Other Selaginella moellendorffii TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SELMODRAFT_71659 Selaginella moellendorffii SELMODRAFT_71659 I 0.826
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I 0.766
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I 0.766
OPUNC02G24210 Oryza punctata OPUNC02G24210 I 0.732
OPUNC04G18500 Oryza punctata OPUNC04G18500 I 0.732
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I 0.732
ONIVA04G19040 Oryza nivara ONIVA04G19040 I 0.732
OMERI02G25900 Oryza meridionalis OMERI02G25900 I 0.732
ONIVA02G28960 Oryza nivara ONIVA02G28960 I 0.732
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I 0.732
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I 0.732
OMERI04G17260 Oryza meridionalis OMERI04G17260 I 0.732
OS02G0656600 Oryza sativa OS02G0656600 I 0.732
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I 0.732
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I 0.732
Pavir.J17742 Panicum virgatum Pavir.J17742 I 0.732
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I 0.732
Sb06g024530 Sorghum bicolor Sb06g024530 I 0.732
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I 0.732
OS04G0549700 Oryza sativa OS04G0549700 I 0.732
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I 0.732
Si010703m.g Setaria italica Si010703m.g I 0.732
BGIOSGA016882 Oryza indica BGIOSGA016882 I 0.732
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I 0.731
Cla015715 Citrullus lanatus Cla015715 I 0.727
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I 0.726
MLOC_75601 Hordeum vulgare MLOC_75601 I 0.722
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I 0.722
POPTR_0003s04920 Populus trichocarpa POPTR_0003s04920 I 0.721
evm.TU.supercontig_109.32 Carica papaya evm.TU.supercontig_109.32 I 0.717
Bo6g077080 Brassica oleracea Bo6g077080 I 0.715
Bra003415 Brassica rapa Bra003415 I 0.715
Thhalv10004870m.g Eutrema salsugineum Thhalv10004870m.g I 0.711
Bra036552 Brassica rapa Bra036552 I 0.711
Bo9g011210 Brassica oleracea Bo9g011210 I 0.711
SELMODRAFT_26594 Selaginella moellendorffii SELMODRAFT_26594 I 0.708
SELMODRAFT_26604 Selaginella moellendorffii SELMODRAFT_26604 I 0.708
TCM_028851 Theobroma cacao TCM_028851 I 0.707
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.706
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I 0.706
Bo8g095240 Brassica oleracea Bo8g095240 I 0.706
Bra007539 Brassica rapa Bra007539 I 0.706
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I 0.705
Lus10038270.g Linum usitatissimum Lus10038270.g I 0.705
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.705
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I 0.705
Bra037041 Brassica rapa Bra037041 I 0.705
Lus10038607.g Linum usitatissimum Lus10038607.g I 0.705
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.704
Bra034535 Brassica rapa Bra034535 I 0.704
mgf022971m Mimulus guttatus mgf022971m I 0.704
Bo3g171090 Brassica oleracea Bo3g171090 I 0.704
Bo7g115860 Brassica oleracea Bo7g115860 I 0.704
Cla012859 Citrullus lanatus Cla012859 I 0.703
Cucsa.038760 Cucumis sativus Cucsa.038760 I 0.703
SapurV1A.2848s0020 Salix purpurea SapurV1A.2848s0020 I 0.702
Lus10025834.g Linum usitatissimum Lus10025834.g I 0.702
SapurV1A.0370s0130 Salix purpurea SapurV1A.0370s0130 I 0.702
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.700
30146.m003535 Ricinus communis 30146.m003535 I 0.699
ERF043 Arabidopsis thaliana AT4G32800 D 0.698
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.698
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.698
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.698
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.698
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.698
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.698
Cucsa.359390 Cucumis sativus Cucsa.359390 I 0.698
PGSC0003DMG400004826 Solanum tuberosum PGSC0003DMG400004826 I 0.695
30174.m008790 Ricinus communis 30174.m008790 I 0.694
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.694
TCM_005639 Theobroma cacao TCM_005639 I 0.694
Bo4g158810 Brassica oleracea Bo4g158810 I 0.694
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.693
Solyc08g078420.1 Solanum lycopersicum Solyc08g078420.1 I 0.693
PGSC0003DMG400004825 Solanum tuberosum PGSC0003DMG400004825 I 0.693
Solyc08g078410.1 Solanum lycopersicum Solyc08g078410.1 I 0.693
POPTR_0001s18800 Populus trichocarpa POPTR_0001s18800 I 0.693
Al_scaffold_0006_1828 Arabidopsis lyrata Al_scaffold_0006_1828 I 0.692
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.692
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.692
Pm017610 Prunus mume Pm017610 I 0.692
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.692
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.692
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.692
ERF034 Arabidopsis thaliana AT2G44940 D 0.692
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.692
Al_scaffold_0004_2818 Arabidopsis lyrata Al_scaffold_0004_2818 I 0.692
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.691
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.691
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.691
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.690
Ciclev10006536m.g Citrus clementina Ciclev10006536m.g I 0.690
orange1.1g041015m.g Citrus sinensis orange1.1g041015m.g I 0.690
evm.TU.supercontig_40.39 Carica papaya evm.TU.supercontig_40.39 I 0.689
VIT_00s0341g00080 Vitis vinifera VIT_00s0341g00080 I 0.689
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.689
PGSC0003DMG400002620 Solanum tuberosum PGSC0003DMG400002620 I 0.689
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I 0.688
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.688
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.688
Bra004878 Brassica rapa Bra004878 I 0.686
Bo4g195280 Brassica oleracea Bo4g195280 I 0.686
Bra040333 Brassica rapa Bra040333 I 0.686
Bo4g024220 Brassica oleracea Bo4g024220 I 0.686
TCM_014892 Theobroma cacao TCM_014892 I 0.685
Solyc12g044390.1 Solanum lycopersicum Solyc12g044390.1 I 0.685
PGSC0003DMG400026461 Solanum tuberosum PGSC0003DMG400026461 I 0.685
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I 0.684
ERF035 Arabidopsis thaliana AT3G60490 D 0.684
MTR_1g006660 Medicago truncatula MTR_1g006660 I 0.684
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.684
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.683
Ca_14911 Cicer arietinum Ca_14911 I 0.683
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.683
Bra034273 Brassica rapa Bra034273 I 0.681
Carubv10024051m.g Capsella rubella Carubv10024051m.g I 0.681
ERF042 Arabidopsis thaliana AT2G25820 I 0.681
Cagra.21659s0001 Capsella grandiflora Cagra.21659s0001 I 0.681
Bra000366 Brassica rapa Bra000366 I 0.680
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I 0.680
Bo3g037480 Brassica oleracea Bo3g037480 I 0.680
Bo1g009990 Brassica oleracea Bo1g009990 I 0.679
Pm013463 Prunus mume Pm013463 I 0.679
Bra011383 Brassica rapa Bra011383 I 0.679
PRUPE_ppa010130mg Prunus persica PRUPE_ppa010130mg I 0.678
Ciclev10027587m.g Citrus clementina Ciclev10027587m.g I 0.678
mgf024816m Mimulus guttatus mgf024816m I 0.678
orange1.1g038538m.g Citrus sinensis orange1.1g038538m.g I 0.678
Pm027339 Prunus mume Pm027339 I 0.678
Gorai.003G063500 Gossypium raimondii Gorai.003G063500 I 0.678
PK01156.1 Cannabis sativa PK01156.1 I 0.677
TCM_044478 Theobroma cacao TCM_044478 I 0.677
MTR_5g012910 Medicago truncatula MTR_5g012910 I 0.677
MTR_2g101340 Medicago truncatula MTR_2g101340 I 0.677