PGSC0003DMG400004826 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400004826 T004354_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF043
M01627_2.00
Arabidopsis thaliana
YRCCGACA

TGTCGGYR
PBM
Weirauch et al.(2014)
pTH7413
0.708 0.840
ERF043
M06651_2.00
Arabidopsis thaliana
NNYCACCGACANHNNN

NNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a
0.708 0.840
ERF043
M06652_2.00
Arabidopsis thaliana
NNYCACCGACANHNNH

DNNDNTGTCGGTGRNN
Dap-seq
OMalley et al.(2016)
At4g32800_col
0.708 0.840
ERF034
M06614_2.00
Arabidopsis thaliana
NHNYCACCGACANHD

HDNTGTCGGTGRNDN
Dap-seq
OMalley et al.(2016)
At2g44940_col_a
0.704 0.860
ERF034
M06615_2.00
Arabidopsis thaliana
NDBCACCGACANH

DNTGTCGGTGVHN
Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a
0.704 0.860
TINY
M01094_2.00
Arabidopsis thaliana
NHRCCGACAN

NTGTCGGYDN
PBM
Lambert et al.(2019)
pTH11541
0.702 0.840
TINY
M06669_2.00
Arabidopsis thaliana
HNYCRCCGACANHDN

NHDNTGTCGGYGRND
Dap-seq
OMalley et al.(2016)
TINY_col_a
0.702 0.840
ERF035
M06631_2.00
Arabidopsis thaliana
YCACCGACANWDNH

DNHWNTGTCGGTGR
Dap-seq
OMalley et al.(2016)
AT3G60490_col_a
0.700 0.840
ERF035
M06632_2.00
Arabidopsis thaliana
NNBCACCGACAHWNNN

NNNWDTGTCGGTGVNN
Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a
0.700 0.840
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400012317 AP2 58 109

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PGSC0003DMG400004825 Solanum tuberosum PGSC0003DMG400004825 I 0.808
Solyc08g078410.1 Solanum lycopersicum Solyc08g078410.1 I 0.808
Solyc08g078420.1 Solanum lycopersicum Solyc08g078420.1 I 0.808
GLYMA07G02001 Glycine max GLYMA07G02001 I 0.754
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I 0.753
Bra003415 Brassica rapa Bra003415 I 0.749
Bo6g077080 Brassica oleracea Bo6g077080 I 0.749
GLYMA08G21650 Glycine max GLYMA08G21650 I 0.746
Lus10038270.g Linum usitatissimum Lus10038270.g I 0.744
Lus10025834.g Linum usitatissimum Lus10025834.g I 0.741
Bra007539 Brassica rapa Bra007539 I 0.740
Bo8g095240 Brassica oleracea Bo8g095240 I 0.740
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I 0.740
MTR_8g013860 Medicago truncatula MTR_8g013860 I 0.740
Bo9g011210 Brassica oleracea Bo9g011210 I 0.739
Bra036552 Brassica rapa Bra036552 I 0.739
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I 0.739
Thhalv10004870m.g Eutrema salsugineum Thhalv10004870m.g I 0.739
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I 0.739
MTR_2g101340 Medicago truncatula MTR_2g101340 I 0.737
MDP0000790788 Malus domestica MDP0000790788 I 0.737
Cla015715 Citrullus lanatus Cla015715 I 0.732
PK01156.1 Cannabis sativa PK01156.1 I 0.732
Cla012859 Citrullus lanatus Cla012859 I 0.731
Cucsa.038760 Cucumis sativus Cucsa.038760 I 0.731
Pm013463 Prunus mume Pm013463 I 0.729
F775_04501 Aegilops tauschii F775_04501 I 0.728
Gorai.003G063500 Gossypium raimondii Gorai.003G063500 I 0.728
Traes_2BL_FC0F8A3DC Triticum aestivum Traes_2BL_FC0F8A3DC I 0.728
Traes_2DL_A336122501 Triticum aestivum Traes_2DL_A336122501 I 0.728
Traes_2AL_43491B9E0 Triticum aestivum Traes_2AL_43491B9E0 I 0.728
MLOC_75601 Hordeum vulgare MLOC_75601 I 0.727
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I 0.727
cassava15622.m1 Manihot esculenta cassava15622.m1 I 0.726
BRADI5G17640 Brachypodium distachyon BRADI5G17640 I 0.725
OMERI02G25900 Oryza meridionalis OMERI02G25900 I 0.723
OMERI04G17260 Oryza meridionalis OMERI04G17260 I 0.723
ONIVA02G28960 Oryza nivara ONIVA02G28960 I 0.723
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I 0.723
BGIOSGA016882 Oryza indica BGIOSGA016882 I 0.723
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I 0.723
OPUNC02G24210 Oryza punctata OPUNC02G24210 I 0.723
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I 0.723
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I 0.723
OS02G0656600 Oryza sativa OS02G0656600 I 0.723
OS04G0549700 Oryza sativa OS04G0549700 I 0.723
Si010703m.g Setaria italica Si010703m.g I 0.723
Sb06g024530 Sorghum bicolor Sb06g024530 I 0.723
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I 0.723
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I 0.723
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I 0.723
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I 0.723
PRUPE_ppa011735mg Prunus persica PRUPE_ppa011735mg I 0.723
OPUNC04G18500 Oryza punctata OPUNC04G18500 I 0.723
ONIVA04G19040 Oryza nivara ONIVA04G19040 I 0.723
evm.TU.supercontig_40.39 Carica papaya evm.TU.supercontig_40.39 I 0.723
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I 0.723
Pavir.J17742 Panicum virgatum Pavir.J17742 I 0.723
chr1.LjT23O20.60.nd Lotus japonicus chr1.LjT23O20.60.nd I 0.721
orange1.1g038538m.g Citrus sinensis orange1.1g038538m.g I 0.718
Ciclev10027587m.g Citrus clementina Ciclev10027587m.g I 0.718
TCM_028851 Theobroma cacao TCM_028851 I 0.718
mgf024816m Mimulus guttatus mgf024816m I 0.716
Bo1g009990 Brassica oleracea Bo1g009990 I 0.715
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.715
Bra011383 Brassica rapa Bra011383 I 0.715
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I 0.715
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.715
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I 0.713
PGSC0003DMG400002620 Solanum tuberosum PGSC0003DMG400002620 I 0.713
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.713
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.713
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I 0.713
Bra037041 Brassica rapa Bra037041 I 0.712
BRADI3G50630 Brachypodium distachyon BRADI3G50630 I 0.712
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I 0.711
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.711
OS04G0550200 Oryza sativa OS04G0550200 I 0.711
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I 0.711
LPERR04G16900 Leersia perrieri LPERR04G16900 I 0.711
Bo7g115860 Brassica oleracea Bo7g115860 I 0.711
Si012254m.g Setaria italica Si012254m.g I 0.711
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.711
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I 0.711
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I 0.711
Bra034535 Brassica rapa Bra034535 I 0.711
Bo3g171090 Brassica oleracea Bo3g171090 I 0.711
OS02G0657000 Oryza sativa OS02G0657000 I 0.711
GRMZM2G172936 Zea mays GRMZM2G172936 I 0.711
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I 0.711
OMERI04G17290 Oryza meridionalis OMERI04G17290 I 0.711
BGIOSGA016884 Oryza indica BGIOSGA016884 I 0.711
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I 0.711
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I 0.711
MLOC_3095 Hordeum vulgare MLOC_3095 I 0.711
LPERR02G21590 Leersia perrieri LPERR02G21590 I 0.711
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I 0.711
ONIVA02G28990 Oryza nivara ONIVA02G28990 I 0.711
OMERI02G25910 Oryza meridionalis OMERI02G25910 I 0.711
OPUNC04G18530 Oryza punctata OPUNC04G18530 I 0.711
ONIVA04G19090 Oryza nivara ONIVA04G19090 I 0.711
OPUNC02G24230 Oryza punctata OPUNC02G24230 I 0.711
30146.m003535 Ricinus communis 30146.m003535 I 0.710
mgf022971m Mimulus guttatus mgf022971m I 0.710
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.708
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I 0.708
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.708
OPUNC04G18520 Oryza punctata OPUNC04G18520 I 0.708
BGIOSGA016883 Oryza indica BGIOSGA016883 I 0.708
OBART04G20820 Oryza barthii OBART04G20820 I 0.708
ERF043 Arabidopsis thaliana AT4G32800 D 0.708
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.708
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I 0.708
PGSC0003DMG400012087 Solanum tuberosum PGSC0003DMG400012087 I 0.708
ONIVA04G19060 Oryza nivara ONIVA04G19060 I 0.708
OS04G0549800 Oryza sativa OS04G0549800 I 0.708
OMERI04G17270 Oryza meridionalis OMERI04G17270 I 0.708
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.708
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I 0.708
Gorai.001G176500 Gossypium raimondii Gorai.001G176500 I 0.706
30174.m008790 Ricinus communis 30174.m008790 I 0.706
cassava17387.m1 Manihot esculenta cassava17387.m1 I 0.705
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.705
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.704
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.704
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.704
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.704
ERF034 Arabidopsis thaliana AT2G44940 D 0.704
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.704
Cla021417 Citrullus lanatus Cla021417 I 0.703
Cucsa.359390 Cucumis sativus Cucsa.359390 I 0.703
Pm017610 Prunus mume Pm017610 I 0.703
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.703
Gorai.007G087100 Gossypium raimondii Gorai.007G087100 I 0.703
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.703
TCM_005639 Theobroma cacao TCM_005639 I 0.703
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.703
Carubv10002601m.g Capsella rubella Carubv10002601m.g I 0.702
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.702
Bo7g095710 Brassica oleracea Bo7g095710 I 0.702
TINY Arabidopsis thaliana AT5G25810 D 0.702
Bra009862 Brassica rapa Bra009862 I 0.702
TCM_014892 Theobroma cacao TCM_014892 I 0.701
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.701
Solyc01g090560.2 Solanum lycopersicum Solyc01g090560.2 I 0.701
PGSC0003DMG400026035 Solanum tuberosum PGSC0003DMG400026035 I 0.701
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.700
Lus10004738.g Linum usitatissimum Lus10004738.g I 0.700
Lus10007799.g Linum usitatissimum Lus10007799.g I 0.700
ERF035 Arabidopsis thaliana AT3G60490 D 0.700
Cucsa.259750 Cucumis sativus Cucsa.259750 I 0.699
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.699
Cla004187 Citrullus lanatus Cla004187 I 0.699
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.699
Bostr.29827s0238 Boechera stricta Bostr.29827s0238 I 0.699
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.699
SapurV1A.0805s0100 Salix purpurea SapurV1A.0805s0100 I 0.698
MTR_5g012910 Medicago truncatula MTR_5g012910 I 0.698
Bo4g195280 Brassica oleracea Bo4g195280 I 0.698
Bra040333 Brassica rapa Bra040333 I 0.698
Bo4g024220 Brassica oleracea Bo4g024220 I 0.698
Bo2g010530 Brassica oleracea Bo2g010530 I 0.698
Bra004878 Brassica rapa Bra004878 I 0.698
Bra023332 Brassica rapa Bra023332 I 0.697
Pavir.Aa00834 Panicum virgatum Pavir.Aa00834 I 0.697
Lus10038607.g Linum usitatissimum Lus10038607.g I 0.697
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I 0.696
Bra027177 Brassica rapa Bra027177 I 0.696
Bo5g126280 Brassica oleracea Bo5g126280 I 0.696
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I 0.696
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.696
Bo3g037480 Brassica oleracea Bo3g037480 I 0.695
SELMODRAFT_71661 Selaginella moellendorffii SELMODRAFT_71661 I 0.695
SELMODRAFT_71659 Selaginella moellendorffii SELMODRAFT_71659 I 0.695
Bra000366 Brassica rapa Bra000366 I 0.695
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.695
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.695
gene25758-v1.0-hybrid Fragaria vesca gene25758-v1.0-hybrid I 0.694
evm.TU.supercontig_7.269 Carica papaya evm.TU.supercontig_7.269 I 0.694
Ca_28185 Cicer arietinum Ca_28185 I 0.694
Gorai.004G289800 Gossypium raimondii Gorai.004G289800 I 0.694
VIT_11s0016g03350 Vitis vinifera VIT_11s0016g03350 I 0.694
Ca_01908 Cicer arietinum Ca_01908 I 0.694
evm.TU.supercontig_109.32 Carica papaya evm.TU.supercontig_109.32 I 0.693
cassava29917.valid.m1 Manihot esculenta cassava29917.valid.m1 I 0.693
mgf019024m Mimulus guttatus mgf019024m I 0.693
Solyc12g044390.1 Solanum lycopersicum Solyc12g044390.1 I 0.693
PGSC0003DMG400026461 Solanum tuberosum PGSC0003DMG400026461 I 0.693
MDP0000174352 Malus domestica MDP0000174352 I 0.692
Gorai.004G281600 Gossypium raimondii Gorai.004G281600 I 0.692
MDP0000652413 Malus domestica MDP0000652413 I 0.691
Ciclev10009138m.g Citrus clementina Ciclev10009138m.g I 0.690
orange1.1g041119m.g Citrus sinensis orange1.1g041119m.g I 0.690
Cucsa.235510 Cucumis sativus Cucsa.235510 I 0.689
Gorai.006G097000 Gossypium raimondii Gorai.006G097000 I 0.689
mgf022802m Mimulus guttatus mgf022802m I 0.689
Carubv10024051m.g Capsella rubella Carubv10024051m.g I 0.688
Cagra.21659s0001 Capsella grandiflora Cagra.21659s0001 I 0.688
PK29340.1 Cannabis sativa PK29340.1 I 0.687
Gorai.010G075300 Gossypium raimondii Gorai.010G075300 I 0.687
Gorai.001G008100 Gossypium raimondii Gorai.001G008100 I 0.687
gene04810-v1.0-hybrid Fragaria vesca gene04810-v1.0-hybrid I 0.687
TCM_037811 Theobroma cacao TCM_037811 I 0.687
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I 0.687
29912.m005463 Ricinus communis 29912.m005463 I 0.687
cassava10514.m1 Manihot esculenta cassava10514.m1 I 0.687
POPTR_0018s09270 Populus trichocarpa POPTR_0018s09270 I 0.687
POPTR_0006s17670 Populus trichocarpa POPTR_0006s17670 I 0.687
Bra034273 Brassica rapa Bra034273 I 0.687
cassava11373.m1 Manihot esculenta cassava11373.m1 I 0.687
ERF042 Arabidopsis thaliana AT2G25820 I 0.687
Thhalv10022278m.g Eutrema salsugineum Thhalv10022278m.g I 0.686
scaffold_301905.1 Arabidopsis lyrata scaffold_301905.1 I 0.686
Carubv10014506m.g Capsella rubella Carubv10014506m.g I 0.686
Cagra.6624s0013 Capsella grandiflora Cagra.6624s0013 I 0.686
SapurV1A.0540s0020 Salix purpurea SapurV1A.0540s0020 I 0.685
Ca_05941 Cicer arietinum Ca_05941 I 0.685
PRUPE_ppa010130mg Prunus persica PRUPE_ppa010130mg I 0.685
gene11882-v1.0-hybrid Fragaria vesca gene11882-v1.0-hybrid I 0.685
Pm027339 Prunus mume Pm027339 I 0.685
GLYMA08G03910 Glycine max GLYMA08G03910 I 0.685
MTR_8g102800 Medicago truncatula MTR_8g102800 I 0.685
chr4.CM0617.510.nd Lotus japonicus chr4.CM0617.510.nd I 0.684
Bostr.26326s0067 Boechera stricta Bostr.26326s0067 I 0.684
GLYMA15G02130 Glycine max GLYMA15G02130 I 0.684
TCM_044478 Theobroma cacao TCM_044478 I 0.684
POPTR_0003s04920 Populus trichocarpa POPTR_0003s04920 I 0.683
OB04G27840 Oryza brachyantha OB04G27840 I 0.683
POPTR_0001s18800 Populus trichocarpa POPTR_0001s18800 I 0.683
MDP0000148178 Malus domestica MDP0000148178 I 0.682
Lus10043240.g Linum usitatissimum Lus10043240.g I 0.682
GLYMA05G35741 Glycine max GLYMA05G35741 I 0.682
Lus10034949.g Linum usitatissimum Lus10034949.g I 0.682
F775_11989 Aegilops tauschii F775_11989 I 0.682
Traes_1BL_E39CD252E Triticum aestivum Traes_1BL_E39CD252E I 0.682
Traes_1AL_88D49649D Triticum aestivum Traes_1AL_88D49649D I 0.682
Lus10011123.g Linum usitatissimum Lus10011123.g I 0.682
GSMUA_AchrUn_randomG24010_001 Musa acuminata GSMUA_AchrUn_randomG24010_001 I 0.681
SapurV1A.0370s0130 Salix purpurea SapurV1A.0370s0130 I 0.681
VIT_00s0341g00080 Vitis vinifera VIT_00s0341g00080 I 0.681
GSMUA_Achr10G21470_001 Musa acuminata GSMUA_Achr10G21470_001 I 0.681
GLYMA13G43210 Glycine max GLYMA13G43210 I 0.681
Al_scaffold_0004_2818 Arabidopsis lyrata Al_scaffold_0004_2818 I 0.681
Al_scaffold_0006_1828 Arabidopsis lyrata Al_scaffold_0006_1828 I 0.681
SapurV1A.2848s0020 Salix purpurea SapurV1A.2848s0020 I 0.681
gene08876-v1.0-hybrid Fragaria vesca gene08876-v1.0-hybrid I 0.680
Traes_2BL_984787AC0 Triticum aestivum Traes_2BL_984787AC0 I 0.679
Traes_2AL_0F08552FB Triticum aestivum Traes_2AL_0F08552FB I 0.679
GLYMA14G22740 Glycine max GLYMA14G22740 I 0.677
SapurV1A.0291s0070 Salix purpurea SapurV1A.0291s0070 I 0.677
PK28082.1 Cannabis sativa PK28082.1 I 0.677
Ciclev10009370m.g Citrus clementina Ciclev10009370m.g I 0.677
MDP0000242611 Malus domestica MDP0000242611 I 0.677
Pm005151 Prunus mume Pm005151 I 0.677
Cucsa.312570 Cucumis sativus Cucsa.312570 I 0.677
29794.m003381 Ricinus communis 29794.m003381 I 0.677
cassava18256.valid.m1 Manihot esculenta cassava18256.valid.m1 I 0.677
cassava17185.m1 Manihot esculenta cassava17185.m1 I 0.677
gene08838-v1.0-hybrid Fragaria vesca gene08838-v1.0-hybrid I 0.677
VIT_04s0008g03400 Vitis vinifera VIT_04s0008g03400 I 0.677
TCM_037194 Theobroma cacao TCM_037194 I 0.677
mgf024703m Mimulus guttatus mgf024703m I 0.677
orange1.1g024791m.g Citrus sinensis orange1.1g024791m.g I 0.677
PRUPE_ppa009533mg Prunus persica PRUPE_ppa009533mg I 0.677
MDP0000241650 Malus domestica MDP0000241650 I 0.677
Ciclev10021740m.g Citrus clementina Ciclev10021740m.g I 0.677
orange1.1g027107m.g Citrus sinensis orange1.1g027107m.g I 0.677