TCM_000606 (Theobroma cacao)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 TCM_000606 T005559_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF115
M06657_2.00
Arabidopsis thaliana
CCGCCGYMRYHDCCR

YGGHDRYKRCGGCGG
Dap-seq
OMalley et al.(2016)
ERF115_col_a
0.728 0.792
ERF115
M06658_2.00
Arabidopsis thaliana
CKCCGCCGYMRYHDY

RHDRYKRCGGCGGMG
Dap-seq
OMalley et al.(2016)
ERF115_colamp_a
0.728 0.792
RAP2-6
M00717_2.00
Arabidopsis thaliana
NBGCYGNH

DNCRGCVN
PBM
Chang et al.(2013)
pTH7225
0.707 0.812
RAP2-6
M00841_2.00
Arabidopsis thaliana
NGCCGHHNNN

NNNDDCGGCN
PBM
Franco-Zorrilla et al.(2014)
RAP2.6
0.707 0.812
RAP2-6
M06579_2.00
Arabidopsis thaliana
HHDYCKCCGCCGYMD

HKRCGGCGGMGRHDD
Dap-seq
OMalley et al.(2016)
RAP26_col_a
0.707 0.812
RAP2-6
M06580_2.00
Arabidopsis thaliana
CGCCGY

RCGGCG
Dap-seq
OMalley et al.(2016)
RAP26_colamp_a
0.707 0.812
ERF109
M00849_2.00
Arabidopsis thaliana
NGCCGNHNN

NNDNCGGCN
PBM
Franco-Zorrilla et al.(2014)
RRTF1
0.687 0.854
ERF109
M06653_2.00
Arabidopsis thaliana
CKSCGCCGYHWHHNN

NNDDWDRCGGCGSMG
Dap-seq
OMalley et al.(2016)
RRTF1_col_a
0.687 0.854
ERF109
M06654_2.00
Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN

NNNDAWDRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a
0.687 0.854
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN

NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.683 0.792
LOC_Os08g36920
M01634_2.00
Oryza sativa
NNNGSCGHNN

NNDCGSCNNN
PBM
Weirauch et al.(2014)
pTH8596
0.679 0.854
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOX91400 AP2 96 146

Links

Other AP2 family TFs
Other Theobroma cacao TFs

252 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0627s0010 Salix purpurea SapurV1A.0627s0010 I 0.741
SapurV1A.0471s0080 Salix purpurea SapurV1A.0471s0080 I 0.741
Gorai.008G075600 Gossypium raimondii Gorai.008G075600 I 0.738
Eucgr.G01970 Eucalyptus grandis Eucgr.G01970 I 0.735
MTR_6g033255 Medicago truncatula MTR_6g033255 I 0.732
VIT_14s0068g01040 Vitis vinifera VIT_14s0068g01040 I 0.729
Si026709m.g Setaria italica Si026709m.g I 0.729
Pavir.Ha01720 Panicum virgatum Pavir.Ha01720 I 0.729
Bra028703 Brassica rapa Bra028703 I 0.729
Pavir.Hb01784 Panicum virgatum Pavir.Hb01784 I 0.729
gene06407-v1.0-hybrid Fragaria vesca gene06407-v1.0-hybrid I 0.728
Bra005932 Brassica rapa Bra005932 I 0.728
cassava19959.m1 Manihot esculenta cassava19959.m1 I 0.728
Bra009272 Brassica rapa Bra009272 I 0.728
fgenesh2_kg.6__690__AT5G07310.1 Arabidopsis lyrata fgenesh2_kg.6__690__AT5G07310.1 I 0.728
Carubv10002723m.g Capsella rubella Carubv10002723m.g I 0.728
Cagra.2662s0009 Capsella grandiflora Cagra.2662s0009 I 0.728
Bostr.13129s0235 Boechera stricta Bostr.13129s0235 I 0.728
Bo9g175390 Brassica oleracea Bo9g175390 I 0.728
Gorai.007G045100 Gossypium raimondii Gorai.007G045100 I 0.728
chr1.CM0094.670.nd Lotus japonicus chr1.CM0094.670.nd I 0.728
Thhalv10015583m.g Eutrema salsugineum Thhalv10015583m.g I 0.728
SapurV1A.0517s0130 Salix purpurea SapurV1A.0517s0130 I 0.728
GLYMA06G17180 Glycine max GLYMA06G17180 I 0.728
Bo3g004290 Brassica oleracea Bo3g004290 I 0.728
TCM_014762 Theobroma cacao TCM_014762 I 0.728
ERF115 Arabidopsis thaliana AT5G07310 D 0.728
POPTR_0012s11030 Populus trichocarpa POPTR_0012s11030 I 0.728
Ca_01387 Cicer arietinum Ca_01387 I 0.727
MTR_3g098580 Medicago truncatula MTR_3g098580 I 0.727
Ciclev10018158m.g Citrus clementina Ciclev10018158m.g I 0.727
Lus10022426.g Linum usitatissimum Lus10022426.g I 0.727
Bo2g008570 Brassica oleracea Bo2g008570 I 0.727
cassava10717.m1 Manihot esculenta cassava10717.m1 I 0.726
PRUPE_ppa008772mg Prunus persica PRUPE_ppa008772mg I 0.726
30147.m014403 Ricinus communis 30147.m014403 I 0.725
RRTF1 Vitis vinifera VIT_03s0063g00460 I 0.725
Solyc12g042210.1 Solanum lycopersicum Solyc12g042210.1 I 0.725
Cla019618 Citrullus lanatus Cla019618 I 0.725
Ciclev10003903m.g Citrus clementina Ciclev10003903m.g I 0.725
orange1.1g005229m.g Citrus sinensis orange1.1g005229m.g I 0.725
Cucsa.156890 Cucumis sativus Cucsa.156890 I 0.725
Ciclev10032575m.g Citrus clementina Ciclev10032575m.g I 0.725
MDP0000894895 Malus domestica MDP0000894895 I 0.725
orange1.1g036963m.g Citrus sinensis orange1.1g036963m.g I 0.725
Pavir.J02402 Panicum virgatum Pavir.J02402 I 0.724
TCM_017352 Theobroma cacao TCM_017352 I 0.724
Gorai.008G210600 Gossypium raimondii Gorai.008G210600 I 0.724
cassava45576.m1 Manihot esculenta cassava45576.m1 I 0.724
Pm024604 Prunus mume Pm024604 I 0.724
GLYMA16G26320 Glycine max GLYMA16G26320 I 0.724
GLYMA16G05190 Glycine max GLYMA16G05190 I 0.724
GLYMA19G27790 Glycine max GLYMA19G27790 I 0.724
GLYMA02G07310 Glycine max GLYMA02G07310 I 0.724
30131.m006971 Ricinus communis 30131.m006971 I 0.724
chr1.CM1880.220.nd Lotus japonicus chr1.CM1880.220.nd I 0.724
Cla007205 Citrullus lanatus Cla007205 I 0.723
Cucsa.250290 Cucumis sativus Cucsa.250290 I 0.723
Cucsa.349200 Cucumis sativus Cucsa.349200 I 0.723
evm.TU.supercontig_13.175 Carica papaya evm.TU.supercontig_13.175 I 0.723
TCM_001301 Theobroma cacao TCM_001301 I 0.721
GSMUA_Achr6G02310_001 Musa acuminata GSMUA_Achr6G02310_001 I 0.721
ERF110 Arabidopsis lyrata fgenesh2_kg.8__881__AT5G50080.1 I 0.721
ERF110 Arabidopsis thaliana AT5G50080 I 0.721
LPERR11G03740 Leersia perrieri LPERR11G03740 I 0.719
Aquca_043_00039 Aquilegia coerulea Aquca_043_00039 I 0.719
Cla007885 Citrullus lanatus Cla007885 I 0.718
POPTR_0007s07090 Populus trichocarpa POPTR_0007s07090 I 0.718
GLYMA06G15341 Glycine max GLYMA06G15341 I 0.718
Ca_21773 Cicer arietinum Ca_21773 I 0.717
Thhalv10014579m.g Eutrema salsugineum Thhalv10014579m.g I 0.717
ATERF2 Arabidopsis lyrata fgenesh2_kg.8__70__AT5G47220.1 I 0.713
Bostr.12302s0024 Boechera stricta Bostr.12302s0024 I 0.713
POPTR_0005s21690 Populus trichocarpa POPTR_0005s21690 I 0.712
ORGLA01G0324200 Oryza glaberrima ORGLA01G0324200 I 0.712
ORUFI01G41960 Oryza rufipogon ORUFI01G41960 I 0.712
ORGLA05G0154400 Oryza glaberrima ORGLA05G0154400 I 0.712
cassava19043.valid.m1 Manihot esculenta cassava19043.valid.m1 I 0.712
OS05G0437100 Oryza sativa OS05G0437100 I 0.712
Carubv10010478m.g Capsella rubella Carubv10010478m.g I 0.712
OS01G0868000 Oryza sativa OS01G0868000 I 0.712
gene27604-v1.0-hybrid Fragaria vesca gene27604-v1.0-hybrid I 0.712
ORUFI05G19030 Oryza rufipogon ORUFI05G19030 I 0.712
BRADI2G24170 Brachypodium distachyon BRADI2G24170 I 0.712
cassava19042.valid.m1 Manihot esculenta cassava19042.valid.m1 I 0.712
Pavir.Ea03713 Panicum virgatum Pavir.Ea03713 I 0.712
LPERR01G33110 Leersia perrieri LPERR01G33110 I 0.712
Ca_04370 Cicer arietinum Ca_04370 I 0.712
OGLUM01G42800 Oryza glumaepatula OGLUM01G42800 I 0.712
MTR_1g098460 Medicago truncatula MTR_1g098460 I 0.712
MLOC_7891 Hordeum vulgare MLOC_7891 I 0.712
GRMZM2G100727 Zea mays GRMZM2G100727 I 0.712
Ca_18387 Cicer arietinum Ca_18387 I 0.712
BGIOSGA000428 Oryza indica BGIOSGA000428 I 0.712
GRMZM2G149756 Zea mays GRMZM2G149756 I 0.712
BGIOSGA019928 Oryza indica BGIOSGA019928 I 0.712
Si002010m.g Setaria italica Si002010m.g I 0.712
ONIVA05G18720 Oryza nivara ONIVA05G18720 I 0.712
Pavir.J03755 Panicum virgatum Pavir.J03755 I 0.712
OMERI01G35460 Oryza meridionalis OMERI01G35460 I 0.712
ONIVA01G43260 Oryza nivara ONIVA01G43260 I 0.712
Cagra.3842s0001 Capsella grandiflora Cagra.3842s0001 I 0.712
VIT_07s0031g00710 Vitis vinifera VIT_07s0031g00710 I 0.711
mgf019280m Mimulus guttatus mgf019280m I 0.709
Cucsa.363830 Cucumis sativus Cucsa.363830 I 0.709
GLYMA20G30835 Glycine max GLYMA20G30835 I 0.709
GRMZM2G457562 Zea mays GRMZM2G457562 I 0.709
Cla014021 Citrullus lanatus Cla014021 I 0.709
ERF110 Vitis vinifera VIT_18s0072g00260 I 0.709
Pm022509 Prunus mume Pm022509 I 0.709
29863.m001066 Ricinus communis 29863.m001066 I 0.709
cassava12737.valid.m1 Manihot esculenta cassava12737.valid.m1 I 0.709
LPERR05G14130 Leersia perrieri LPERR05G14130 I 0.709
GLYMA10G36760 Glycine max GLYMA10G36760 I 0.709
Ciclev10001138m.g Citrus clementina Ciclev10001138m.g I 0.709
OPUNC11G03940 Oryza punctata OPUNC11G03940 I 0.709
Gorai.010G131500 Gossypium raimondii Gorai.010G131500 I 0.709
Gorai.009G255400 Gossypium raimondii Gorai.009G255400 I 0.709
OPUNC05G15760 Oryza punctata OPUNC05G15760 I 0.709
MDP0000235028 Malus domestica MDP0000235028 I 0.709
SapurV1A.0134s0150 Salix purpurea SapurV1A.0134s0150 I 0.709
orange1.1g013225m.g Citrus sinensis orange1.1g013225m.g I 0.709
MDP0000242979 Malus domestica MDP0000242979 I 0.709
Gorai.005G078100 Gossypium raimondii Gorai.005G078100 I 0.709
Lus10028679.g Linum usitatissimum Lus10028679.g I 0.709
Cagra.14503s0008 Capsella grandiflora Cagra.14503s0008 I 0.709
Carubv10028647m.g Capsella rubella Carubv10028647m.g I 0.709
GSMUA_Achr6G25680_001 Musa acuminata GSMUA_Achr6G25680_001 I 0.709
Eucgr.F04203 Eucalyptus grandis Eucgr.F04203 I 0.709
evm.TU.supercontig_49.94 Carica papaya evm.TU.supercontig_49.94 I 0.709
SapurV1A.3099s0010 Salix purpurea SapurV1A.3099s0010 I 0.708
SapurV1A.0327s0220 Salix purpurea SapurV1A.0327s0220 I 0.708
GRMZM2G016434 Zea mays GRMZM2G016434 I 0.708
RAP2-6 Arabidopsis thaliana AT1G43160 D 0.707
MDP0000190237 Malus domestica MDP0000190237 I 0.707
Pavir.J17038 Panicum virgatum Pavir.J17038 I 0.707
Bostr.15774s0146 Boechera stricta Bostr.15774s0146 I 0.707
chr4.CM0175.50.nd Lotus japonicus chr4.CM0175.50.nd I 0.706
Sb05g004170 Sorghum bicolor Sb05g004170 I 0.706
ABR1 Vitis vinifera VIT_07s0031g01980 I 0.706
Eucgr.F02691 Eucalyptus grandis Eucgr.F02691 I 0.705
chr2.LjT11L13.40.nc Lotus japonicus chr2.LjT11L13.40.nc I 0.705
GLYMA02G08835 Glycine max GLYMA02G08835 I 0.705
BRADI2G56140 Brachypodium distachyon BRADI2G56140 I 0.705
GLYMA16G27950 Glycine max GLYMA16G27950 I 0.705
Solyc12g056590.1 Solanum lycopersicum Solyc12g056590.1 I 0.705
PGSC0003DMG400018803 Solanum tuberosum PGSC0003DMG400018803 I 0.705
MTR_6g037610 Medicago truncatula MTR_6g037610 I 0.705
ORGLA11G0040400 Oryza glaberrima ORGLA11G0040400 I 0.704
MLOC_68290 Hordeum vulgare MLOC_68290 I 0.704
ORUFI11G04200 Oryza rufipogon ORUFI11G04200 I 0.704
OS11G0168500 Oryza sativa OS11G0168500 I 0.704
Cucsa.365850 Cucumis sativus Cucsa.365850 I 0.704
POPTR_0002s06620 Populus trichocarpa POPTR_0002s06620 I 0.704
TCM_035671 Theobroma cacao TCM_035671 I 0.704
Cla003851 Citrullus lanatus Cla003851 I 0.704
Traes_5BL_60FC12DA6 Triticum aestivum Traes_5BL_60FC12DA6 I 0.704
Pavir.J04335 Panicum virgatum Pavir.J04335 I 0.704
chr5.CM0052.240.nd Lotus japonicus chr5.CM0052.240.nd I 0.704
OGLUM11G04050 Oryza glumaepatula OGLUM11G04050 I 0.704
BGIOSGA034432 Oryza indica BGIOSGA034432 I 0.704
Traes_5BS_80C46D9C4 Triticum aestivum Traes_5BS_80C46D9C4 I 0.704
ONIVA11G04340 Oryza nivara ONIVA11G04340 I 0.704
Pavir.Cb02005 Panicum virgatum Pavir.Cb02005 I 0.704
GRMZM2G076896 Zea mays GRMZM2G076896 I 0.702
mgf000075m Mimulus guttatus mgf000075m I 0.701
MDP0000668122 Malus domestica MDP0000668122 I 0.700
PGSC0003DMG400006369 Solanum tuberosum PGSC0003DMG400006369 I 0.700
Solyc04g071770.2 Solanum lycopersicum Solyc04g071770.2 I 0.700
LPERR12G03800 Leersia perrieri LPERR12G03800 I 0.699
gene06406-v1.0-hybrid Fragaria vesca gene06406-v1.0-hybrid I 0.699
Ca_19135 Cicer arietinum Ca_19135 I 0.698
Cagra.4553s0019 Capsella grandiflora Cagra.4553s0019 I 0.695
Carubv10027012m.g Capsella rubella Carubv10027012m.g I 0.695
scaffold_802838.1 Arabidopsis lyrata scaffold_802838.1 I 0.695
Bo3g109240 Brassica oleracea Bo3g109240 I 0.695
Bo2g161710 Brassica oleracea Bo2g161710 I 0.695
Bra029302 Brassica rapa Bra029302 I 0.695
ERF114 Arabidopsis thaliana AT5G61890 I 0.695
Thhalv10005416m.g Eutrema salsugineum Thhalv10005416m.g I 0.695
Bostr.26833s0047 Boechera stricta Bostr.26833s0047 I 0.695
mgf023779m Mimulus guttatus mgf023779m I 0.694
GSMUA_Achr2G17810_001 Musa acuminata GSMUA_Achr2G17810_001 I 0.693
OBART02G18470 Oryza barthii OBART02G18470 I 0.693
OPUNC02G16450 Oryza punctata OPUNC02G16450 I 0.693
BGIOSGA006362 Oryza indica BGIOSGA006362 I 0.693
Pavir.Aa02595 Panicum virgatum Pavir.Aa02595 I 0.693
ORUFI02G19470 Oryza rufipogon ORUFI02G19470 I 0.693
ONIVA02G20490 Oryza nivara ONIVA02G20490 I 0.693
Si018024m.g Setaria italica Si018024m.g I 0.693
Sb04g021160 Sorghum bicolor Sb04g021160 I 0.693
Lus10006796.g Linum usitatissimum Lus10006796.g I 0.692
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.692
Lus10005805.g Linum usitatissimum Lus10005805.g I 0.692
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.691
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.691
OS01G0313300 Oryza sativa OS01G0313300 I 0.691
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.691
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.691
Bo7g048170 Brassica oleracea Bo7g048170 I 0.691
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.691
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.691
Si002845m.g Setaria italica Si002845m.g I 0.691
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.691
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.691
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.691
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.691
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.691
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.691
Bra030095 Brassica rapa Bra030095 I 0.691
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.691
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.690
GRMZM2G544539 Zea mays GRMZM2G544539 I 0.690
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.689
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.689
Bo1g007330 Brassica oleracea Bo1g007330 I 0.687
Bo7g116860 Brassica oleracea Bo7g116860 I 0.687
Carubv10007825m.g Capsella rubella Carubv10007825m.g I 0.687
Cagra.6777s0012 Capsella grandiflora Cagra.6777s0012 I 0.687
RRTF1 Arabidopsis lyrata scaffold_700692.1 I 0.687
Bostr.7867s1298 Boechera stricta Bostr.7867s1298 I 0.687
Thhalv10027524m.g Eutrema salsugineum Thhalv10027524m.g I 0.687
Bra011529 Brassica rapa Bra011529 I 0.687
ERF109 Arabidopsis thaliana AT4G34410 D 0.687
Bo3g168910 Brassica oleracea Bo3g168910 I 0.687
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.686
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.686
GSMUA_Achr10G19950_001 Musa acuminata GSMUA_Achr10G19950_001 I 0.684
Pavir.J19559 Panicum virgatum Pavir.J19559 I 0.684
29900.m001561 Ricinus communis 29900.m001561 I 0.684
Bo2g011200 Brassica oleracea Bo2g011200 I 0.683
ERF113 Arabidopsis thaliana AT5G13330 D 0.683
Bostr.2902s0068 Boechera stricta Bostr.2902s0068 I 0.683
Bra023404 Brassica rapa Bra023404 I 0.683
Rap2.6L Arabidopsis lyrata fgenesh2_kg.6__1285__AT5G13330.1 I 0.683
Thhalv10014575m.g Eutrema salsugineum Thhalv10014575m.g I 0.683
Carubv10001831m.g Capsella rubella Carubv10001831m.g I 0.683
Eucgr.I00292 Eucalyptus grandis Eucgr.I00292 I 0.682
Bra008835 Brassica rapa Bra008835 I 0.682
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.680
LOC_Os08g36920 Oryza sativa LOC_Os08g36920 D 0.679
evm.TU.supercontig_62.11 Carica papaya evm.TU.supercontig_62.11 I 0.679
OS08G0474000 Oryza sativa OS08G0474000 I 0.679
OPUNC08G15760 Oryza punctata OPUNC08G15760 I 0.679
ONIVA08G19930 Oryza nivara ONIVA08G19930 I 0.679
OLONG_013554 Oryza longistaminata OLONG_013554 I 0.679
OGLUM08G18720 Oryza glumaepatula OGLUM08G18720 I 0.679
gene24044-v1.0-hybrid Fragaria vesca gene24044-v1.0-hybrid I 0.679
OPUNC04G22340 Oryza punctata OPUNC04G22340 I 0.678
Gorai.010G156600 Gossypium raimondii Gorai.010G156600 I 0.678
VIT_07s0031g00720 Vitis vinifera VIT_07s0031g00720 I 0.677
SapurV1A.0826s0010 Salix purpurea SapurV1A.0826s0010 I 0.677