CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Lus10036141.g *(Linum usitatissimum)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00847 (AP2)	IPR001471	Lus10036141.g	T008905_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q9XHD4_PETHY M09737_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AP2A_01	0.795	0.845
RAP2.7 M00845_2.00	Arabidopsis thaliana	KRCGRGGD	HCCYCGYM	PBM Franco-Zorrilla et al.(2014) TOE1	0.793	0.874
Q9XHD3_PETHY M09736_2.00	Petunia x hybrida	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$AP2B_01	0.781	0.835
P93632_MAIZE M09712_2.00	Zea mays	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$GL15_01	0.749	0.728
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Lus10036141	AP2	164	230	SQYRGVTFYRRTGRWESHIWYYCLLWTAGNRFIWVRILLVAFVHSGGFDTAHAAARAYDRAAIKFRG
Lus10036141	AP2	273	324	SKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAINCNGR

Links
Other AP2 family TFs
Other *Linum usitatissimum* TFs