Lus10036141.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10036141.g T008905_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.795 0.845
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.793 0.874
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.781 0.835
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.749 0.728
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10036141 AP2 164 230
Lus10036141 AP2 273 324

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

236 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_11786 Ancylostoma caninum ANCCAN_11786 N 0.000
ANCCAN_12440 Ancylostoma caninum ANCCAN_12440 N 0.000
ANCCEY_14894 Ancylostoma ceylanicum ANCCEY_14894 N 0.000
ALUE_0000629201 Ascaris lumbricoides ALUE_0000629201 N 0.000
ASU_00773 Ascaris suum ASU_00773 N 0.000
CBN19906 Caenorhabditis brenneri CBN19906 N 0.000
CBG15730 Caenorhabditis briggsae CBG15730 N 0.000
nhr-80 Caenorhabditis elegans WBGene00003670 N 0.000
EVEC_0000383901 Enterobius vermicularis EVEC_0000383901 N 0.000
HCOI00823800 Haemonchus contortus HCOI00823800 N 0.000
OESDEN_24381 Oesophagostomum dentatum OESDEN_24381 N 0.000
scaffold1247-EXSNAP2012.3 Pristionchus exspectatus scaffold1247-EXSNAP2012.3 N 0.000
SVUK_0000739401 Strongylus vulgaris SVUK_0000739401 N 0.000
TELCIR_04754 Teladorsagia circumcincta TELCIR_04754 N 0.000