MDP0000285955 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000285955 T009073_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TOE2
M00851_2.00
Arabidopsis thaliana
NNNNTACGAGGWN

NWCCTCGTANNNN
PBM
Franco-Zorrilla et al.(2014)
TOE2
0.820 0.938
SMZ
M08402_2.00
Arabidopsis thaliana
YCTCGTAC

GTACGAGR
ChIP-chip
Mathelier et al.(2014)
MA0553.1
0.812 0.938
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000285955 AP2 155 212

Links

Other AP2 family TFs
Other Malus domestica TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Al_scaffold_0003_2798 Arabidopsis lyrata Al_scaffold_0003_2798 I 0.685
Bo6g068410 Brassica oleracea Bo6g068410 I 0.805
Bo8g087280 Brassica oleracea Bo8g087280 I 0.812
Bo9g141100 Brassica oleracea Bo9g141100 I 0.820
Bostr.0697s0115 Boechera stricta Bostr.0697s0115 I 0.812
Bostr.23794s0149 Boechera stricta Bostr.23794s0149 I 0.798
Bostr.26833s0222 Boechera stricta Bostr.26833s0222 I 0.820
Bra002510 Brassica rapa Bra002510 I 0.820
Bra007123 Brassica rapa Bra007123 I 0.812
Bra020262 Brassica rapa Bra020262 I 0.820
Cagra.0716s0040 Capsella grandiflora Cagra.0716s0040 I 0.805
Cagra.1317s0005 Capsella grandiflora Cagra.1317s0005 I 0.820
Cagra.1742s0021 Capsella grandiflora Cagra.1742s0021 I 0.812
Carubv10018526m.g Capsella rubella Carubv10018526m.g I 0.812
Carubv10023614m.g Capsella rubella Carubv10023614m.g I 0.805
Carubv10026292m.g Capsella rubella Carubv10026292m.g I 0.820
Ca_26761 Cicer arietinum Ca_26761 I 0.773
Cla020387 Citrullus lanatus Cla020387 I 0.824
Cucsa.165940 Cucumis sativus Cucsa.165940 I 0.824
Eucgr.G02793 Eucalyptus grandis Eucgr.G02793 I 0.812
gene23316-v1.0-hybrid Fragaria vesca gene23316-v1.0-hybrid I 0.853
GLYMA02G09600 Glycine max GLYMA02G09600 I 0.808
GLYMA10G22390 Glycine max GLYMA10G22390 I 0.808
Gorai.003G139800 Gossypium raimondii Gorai.003G139800 I 0.824
Gorai.011G241700 Gossypium raimondii Gorai.011G241700 I 0.824
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.824
Lus10040365.g Linum usitatissimum Lus10040365.g I 0.824
MDP0000281079 Malus domestica MDP0000281079 I 0.866
MTR_1g049140 Medicago truncatula MTR_1g049140 I 0.805
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.824
PGSC0003DMG400012038 Solanum tuberosum PGSC0003DMG400012038 I 0.824
PK16652.1 Cannabis sativa PK16652.1 I 0.824
Pm018608 Prunus mume Pm018608 I 0.857
PRUPE_ppa018704mg Prunus persica PRUPE_ppa018704mg I 0.857
Sb10g001490 Sorghum bicolor Sb10g001490 I 0.824
SMZ Arabidopsis thaliana AT3G54990 D 0.812
SMZ Arabidopsis lyrata fgenesh2_kg.5__1910__AT3G54990.1 I 0.812
SNZ Arabidopsis thaliana AT2G39250 I 0.798
SNZ Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001673 I 0.798
Thhalv10010513m.g Eutrema salsugineum Thhalv10010513m.g I 0.812
Thhalv10013367m.g Eutrema salsugineum Thhalv10013367m.g I 0.820
TOE2 Arabidopsis thaliana AT5G60120 D 0.820