CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g030591m.g
(
Citrus sinensis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
orange1.1g030591m.g
T009248_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g030591m
AP2
13
63
PSYRGIRCRNSKWVSEIREPRKSTRIWLGTYPTPEMAAAAYDVAALALKGS
Links
Other
AP2
family TFs
Other
Citrus sinensis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10023840m.g
Citrus clementina
Ciclev10023840m.g
I
0.783
Traes_6DL_FD6D63D1A
Triticum aestivum
Traes_6DL_FD6D63D1A
N
0.703
MLOC_62554
Hordeum vulgare
MLOC_62554
N
0.703
MDP0000262710
Malus domestica
MDP0000262710
I
0.701
BRADI3G51610
Brachypodium distachyon
BRADI3G51610
N
0.698
scaffold_101390.1
Arabidopsis lyrata
scaffold_101390.1
I
0.679
fgenesh1_pm.C_scaffold_1001063
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001063
I
0.679
Gorai.003G162600
Gossypium raimondii
Gorai.003G162600
I
0.678