CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc03g083110.1
(
Solanum lycopersicum
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
Solyc03g083110.1
T010523_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc03g083110.1.1
AP2
47
96
SKFKGVVGQNNGHWGAQIYANHQRIWLGTFKTETDAAMAYDSAAIRLLGP
Solyc03g083110.1.1
B3
171
266
FQKELTPSDVGKLNRLVIPKKYATKYFPQIQDEEMIFYDTSRRLWKFRYCYWKSSQSFVFTKGWNKFVKDKGLRAKDTIVFNLCEFKNGTKENCNA
Links
Other
AP2,B3
family TFs
Other
Solanum lycopersicum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g018549m.g
Citrus sinensis
orange1.1g018549m.g
N
0.738
Ciclev10010403m.g
Citrus clementina
Ciclev10010403m.g
N
0.731
Cucsa.350980
Cucumis sativus
Cucsa.350980
N
0.717
Cla019009
Citrullus lanatus
Cla019009
N
0.717