orange1.1g018549m.g (Citrus sinensis)
AP2,B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2)
PF02362 (B3) 		IPR001471
IPR003340 		orange1.1g018549m.g T010622_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g018549m AP2 43 91
orange1.1g018549m B3 166 280
orange1.1g020733m AP2 43 91
orange1.1g020733m B3 134 248

Links

Other AP2,B3 family TFs
Other Citrus sinensis TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10010403m.g Citrus clementina Ciclev10010403m.g N 0.973
gene24427-v1.0-hybrid Fragaria vesca gene24427-v1.0-hybrid N 0.819
Cla019009 Citrullus lanatus Cla019009 N 0.805
PRUPE_ppa026651mg Prunus persica PRUPE_ppa026651mg N 0.803
Pm028198 Prunus mume Pm028198 N 0.803
Cucsa.350980 Cucumis sativus Cucsa.350980 N 0.792
PK28088.1 Cannabis sativa PK28088.1 N 0.766
Eucgr.C00358 Eucalyptus grandis Eucgr.C00358 N 0.762
orange1.1g046898m.g Citrus sinensis orange1.1g046898m.g N 0.761
Ciclev10017535m.g Citrus clementina Ciclev10017535m.g N 0.761
29650.m000279 Ricinus communis 29650.m000279 N 0.759
SapurV1A.2134s0020 Salix purpurea SapurV1A.2134s0020 N 0.758
cassava14279.m1 Manihot esculenta cassava14279.m1 N 0.750
Gorai.013G249100 Gossypium raimondii Gorai.013G249100 N 0.750
POPTR_0003s21810 Populus trichocarpa POPTR_0003s21810 N 0.743
Solyc03g083110.1 Solanum lycopersicum Solyc03g083110.1 N 0.738
POPTR_0018s11780 Populus trichocarpa POPTR_0018s11780 N 0.736
evm.TU.contig_32277 Carica papaya evm.TU.contig_32277 N 0.733
28008.m000029 Ricinus communis 28008.m000029 N 0.732
Aquca_011_00122 Aquilegia coerulea Aquca_011_00122 N 0.730
POPTR_0006s20040 Populus trichocarpa POPTR_0006s20040 N 0.727
LjSGA_031594.1 Lotus japonicus LjSGA_031594.1 N 0.725
cassava27051.m1 Manihot esculenta cassava27051.m1 N 0.718
cassava8667.m1 Manihot esculenta cassava8667.m1 N 0.718
Bo3g179890 Brassica oleracea Bo3g179890 N 0.711
Bra014282 Brassica rapa Bra014282 N 0.704
SapurV1A.0009s0070 Salix purpurea SapurV1A.0009s0070 N 0.704
Gorai.009G020300 Gossypium raimondii Gorai.009G020300 N 0.703
Lus10036282.g Linum usitatissimum Lus10036282.g N 0.700