CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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28008.m000029
(
Ricinus communis
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
28008.m000029
T010552_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
28008.m000029
AP2
46
95
SRFRGVVPHQNGHWGCQIYANHQRIWLGTFKSEKEAAMAYDSAALKLRSG
28008.m000029
B3
169
274
FQKELTPSDVGKLNRLVIPKRFAIKFFSHISESVEQNIGGNKANDGQLAFYDKAMKLWKFRYCYWKSSQSYVFTRGWNRFVKEKQLKANDTIAICLCECRENAELT
Links
Other
AP2,B3
family TFs
Other
Ricinus communis
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava8667.m1
Manihot esculenta
cassava8667.m1
N
0.817
POPTR_0006s20040
Populus trichocarpa
POPTR_0006s20040
N
0.748
SapurV1A.2134s0020
Salix purpurea
SapurV1A.2134s0020
N
0.742
Ciclev10010403m.g
Citrus clementina
Ciclev10010403m.g
N
0.738
Cucsa.350980
Cucumis sativus
Cucsa.350980
N
0.738
gene24427-v1.0-hybrid
Fragaria vesca
gene24427-v1.0-hybrid
N
0.736
Eucgr.C00358
Eucalyptus grandis
Eucgr.C00358
N
0.734
Pm028198
Prunus mume
Pm028198
N
0.732
PRUPE_ppa026651mg
Prunus persica
PRUPE_ppa026651mg
N
0.732
Cla019009
Citrullus lanatus
Cla019009
N
0.732
orange1.1g018549m.g
Citrus sinensis
orange1.1g018549m.g
N
0.732
LjSGA_031594.1
Lotus japonicus
LjSGA_031594.1
N
0.725
POPTR_0018s11780
Populus trichocarpa
POPTR_0018s11780
N
0.725
29650.m000279
Ricinus communis
29650.m000279
N
0.717
cassava27051.m1
Manihot esculenta
cassava27051.m1
N
0.711
Gorai.013G249100
Gossypium raimondii
Gorai.013G249100
N
0.701