CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.2134s0020
(
Salix purpurea
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
SapurV1A.2134s0020
T010638_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.2134s0020.1.p
AP2
45
94
SKFKGVVPQPNGHWGCQIYANHLRIWLGTFKSEKEAAMAYDSAATKLRSG
SapurV1A.2134s0020.1.p
B3
168
276
FRKELTPSDVGKLNRLVVPKKYAIKYFPHVSESSREDEAAGKLDDVMLAFFDKSMKLWKFRYCYWKSSQSYVFTRGWNRFVKENKLKANDTIVFCSCEGVETVDSADQT
SapurV1A.2134s0020.2.p
AP2
45
94
SKFKGVVPQPNGHWGCQIYANHLRIWLGTFKSEKEAAMAYDSAATKLRSG
SapurV1A.2134s0020.2.p
B3
168
276
FRKELTPSDVGKLNRLVVPKKYAIKYFPHVSESSREDEAAGKLDDVMLAFFDKSMKLWKFRYCYWKSSQSYVFTRGWNRFVKENKLKANDTIVFCSCEGVETVDSADQT
Links
Other
AP2,B3
family TFs
Other
Salix purpurea
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0006s20040
Populus trichocarpa
POPTR_0006s20040
N
0.797
Ciclev10010403m.g
Citrus clementina
Ciclev10010403m.g
N
0.765
POPTR_0018s11780
Populus trichocarpa
POPTR_0018s11780
N
0.758
orange1.1g018549m.g
Citrus sinensis
orange1.1g018549m.g
N
0.758
Pm028198
Prunus mume
Pm028198
N
0.746
PRUPE_ppa026651mg
Prunus persica
PRUPE_ppa026651mg
N
0.746
28008.m000029
Ricinus communis
28008.m000029
N
0.742
gene24427-v1.0-hybrid
Fragaria vesca
gene24427-v1.0-hybrid
N
0.736
orange1.1g046898m.g
Citrus sinensis
orange1.1g046898m.g
N
0.732
Ciclev10017535m.g
Citrus clementina
Ciclev10017535m.g
N
0.732
Eucgr.C00358
Eucalyptus grandis
Eucgr.C00358
N
0.727
Cucsa.350980
Cucumis sativus
Cucsa.350980
N
0.725
Cla019009
Citrullus lanatus
Cla019009
N
0.725
Gorai.013G249100
Gossypium raimondii
Gorai.013G249100
N
0.722
29650.m000279
Ricinus communis
29650.m000279
N
0.717
cassava8667.m1
Manihot esculenta
cassava8667.m1
N
0.711
PK28088.1
Cannabis sativa
PK28088.1
N
0.709
POPTR_0003s21810
Populus trichocarpa
POPTR_0003s21810
N
0.700