CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PK28088.1
(
Cannabis sativa
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
PK28088.1
T010646_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK28088.1
AP2
64
112
AKYKGTVKQQNGHWGAQIYANHQRIWLGTFKLEEDAAMAYDSAAIRLRC
PK28088.1
B3
189
296
FQKELTPSDVGKLNRLVIPKKYAIKYLPHISEEDSEEKESLGDGTVDDMEVVFHDHSMRSWKFRYCYWRSSQSYVFTRGWSRFVKEKKLKANDTIAFYLCEQRNVLNE
Links
Other
AP2,B3
family TFs
Other
Cannabis sativa
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa026651mg
Prunus persica
PRUPE_ppa026651mg
N
0.766
orange1.1g018549m.g
Citrus sinensis
orange1.1g018549m.g
N
0.766
Pm028198
Prunus mume
Pm028198
N
0.766
Eucgr.C00358
Eucalyptus grandis
Eucgr.C00358
N
0.759
Ciclev10010403m.g
Citrus clementina
Ciclev10010403m.g
N
0.759
Cucsa.350980
Cucumis sativus
Cucsa.350980
N
0.752
Cla019009
Citrullus lanatus
Cla019009
N
0.752
Ciclev10017535m.g
Citrus clementina
Ciclev10017535m.g
N
0.739
orange1.1g046898m.g
Citrus sinensis
orange1.1g046898m.g
N
0.739
LjSGA_031594.1
Lotus japonicus
LjSGA_031594.1
N
0.731
Gorai.013G249100
Gossypium raimondii
Gorai.013G249100
N
0.723
gene24427-v1.0-hybrid
Fragaria vesca
gene24427-v1.0-hybrid
N
0.722
29650.m000279
Ricinus communis
29650.m000279
N
0.717
SapurV1A.2134s0020
Salix purpurea
SapurV1A.2134s0020
N
0.709
POPTR_0003s21810
Populus trichocarpa
POPTR_0003s21810
N
0.709
Bo3g179890
Brassica oleracea
Bo3g179890
N
0.704
SapurV1A.0009s0070
Salix purpurea
SapurV1A.0009s0070
N
0.704
cassava27051.m1
Manihot esculenta
cassava27051.m1
N
0.704
VIT_11s0037g00010
Vitis vinifera
VIT_11s0037g00010
N
0.702