SU7_2011 (Saccharomyces arboricola)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 SU7_2011 T012363_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PHD1
M00006_2.00
Saccharomyces cerevisiae
GMTGCAKG

CMTGCAKC
PBM
Badis et al.(2008)
PHD1_4559
0.834 0.965
PHD1
M01516_2.00
Saccharomyces cerevisiae
NBMTGCANN

NNTGCAKVN
PBM
Zhu et al.(2009)
Phd1
0.834 0.965
PHD1
M07437_2.00
Saccharomyces cerevisiae
NSMTGCABNN

NNVTGCAKSN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0355.1
0.834 0.965
PHD1
M07547_2.00
Saccharomyces cerevisiae
VCACACCCACACMCCACACMCNNMCVCH

DGBGKNNGKGTGTGGKGTGTGGGTGTGB
ChIP-exo
Rhee et al.(2011)
Phd1_1
0.834 0.965
PHD1
M07548_2.00
Saccharomyces cerevisiae
MYGCRC

GYGCRK
ChIP-exo
Rhee et al.(2011)
Phd1_2
0.834 0.965
PHD1
M07549_2.00
Saccharomyces cerevisiae
TAGCCGCCGAR

YTCGGCGGCTA
ChIP-exo
Rhee et al.(2011)
Phd1_3
0.834 0.965
PHD1
M08475_2.00
Saccharomyces cerevisiae
SCNGCRGG

CCYGCNGS
Misc
DeBoer et al.(2011)
YKL043W_393
0.834 0.965
PHD1
M08476_2.00
Saccharomyces cerevisiae
NSMTGCABNN

NNVTGCAKSN
Misc
DeBoer et al.(2011)
YKL043W_554
0.834 0.965
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJS42888 APSES 204 334

Links

Other APSES family TFs
Other Saccharomyces arboricola TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action