CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR09G14110
(
Leersia perrieri
)
ARID/BRIGHT,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
PF00505 (HMG_box)
IPR001606
IPR000910
LPERR09G14110
T017039_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR09G14110.1
ARID/BRIGHT
30
116
NRAAFMDTLRRFHSLMGTKFIRIPVIGGKELDLHTLYVEVTSRGGIAKVMEERRWREVMAQFRFSPTTTSASYVMRRYYLSLLYHYE
LPERR09G14110.1
Sox
252
319
PKPSRSGYNFFFKEKHTELKMTHPNMERDYTKMIGEAWNRLDHDDKLVYYRCSGKDKERYKREMREYN
Links
Other
ARID/BRIGHT,Sox
family TFs
Other
Leersia perrieri
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB09G24850
Oryza brachyantha
OB09G24850
N
0.824
OPUNC09G16660
Oryza punctata
OPUNC09G16660
N
0.804
OMERI09G13880
Oryza meridionalis
OMERI09G13880
N
0.799
ORGLA09G0144900
Oryza glaberrima
ORGLA09G0144900
N
0.797
BGIOSGA029336
Oryza indica
BGIOSGA029336
N
0.797
OBART09G18350
Oryza barthii
OBART09G18350
N
0.787
ONIVA09G19470
Oryza nivara
ONIVA09G19470
N
0.787
ORUFI09G19820
Oryza rufipogon
ORUFI09G19820
N
0.779
OGLUM09G18910
Oryza glumaepatula
OGLUM09G18910
N
0.779
OLONG_021805
Oryza longistaminata
OLONG_021805
N
0.748