fgenesh2_kg.1__4154__AT1G50680.1 (Arabidopsis lyrata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 fgenesh2_kg.1__4154__AT1G50680.1 T019204_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.928 0.928
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__4154__AT1G50680.1 B3 157 268

Links

Other B3 family TFs
Other Arabidopsis lyrata TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G50680 Arabidopsis thaliana AT1G50680 I 0.948
Bostr.26675s0109 Boechera stricta Bostr.26675s0109 I 0.938
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I 0.938
AT1G51120 Arabidopsis thaliana AT1G51120 D 0.928
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I 0.918
Carubv10011257m.g Capsella rubella Carubv10011257m.g I 0.907
Thhalv10012356m.g Eutrema salsugineum Thhalv10012356m.g I 0.876
Bo6g024770 Brassica oleracea Bo6g024770 I 0.866
Thhalv10012152m.g Eutrema salsugineum Thhalv10012152m.g I 0.835
Bo6g022450 Brassica oleracea Bo6g022450 I 0.798
Carubv10011592m.g Capsella rubella Carubv10011592m.g I 0.794
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I 0.794
Bra030458 Brassica rapa Bra030458 I 0.792
Bo5g081270 Brassica oleracea Bo5g081270 I 0.763
Bo6g022280 Brassica oleracea Bo6g022280 I 0.742
TCM_040397 Theobroma cacao TCM_040397 I 0.742
Bra018854 Brassica rapa Bra018854 I 0.732
Bra018869 Brassica rapa Bra018869 I 0.731
Thhalv10012161m.g Eutrema salsugineum Thhalv10012161m.g I 0.711