Thhalv10012356m.g (Eutrema salsugineum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Thhalv10012356m.g T024242_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G51120
M01696_2.00 		Arabidopsis thaliana
NNNNYRNNNN
NNNNYRNNNN		 PBM
Weirauch et al.(2014)
pTH8659 		0.867 0.867
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10012356m B3 182 293

Links

Other B3 family TFs
Other Eutrema salsugineum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.26675s0076 Boechera stricta Bostr.26675s0076 I 0.908
AT1G51120 Arabidopsis thaliana AT1G51120 D 0.885
fgenesh2_kg.1__4181__AT1G51120.1 Arabidopsis lyrata fgenesh2_kg.1__4181__AT1G51120.1 I 0.878
fgenesh2_kg.1__4154__AT1G50680.1 Arabidopsis lyrata fgenesh2_kg.1__4154__AT1G50680.1 I 0.876
Bostr.26675s0109 Boechera stricta Bostr.26675s0109 I 0.857
Thhalv10012152m.g Eutrema salsugineum Thhalv10012152m.g I 0.847
Bo6g024770 Brassica oleracea Bo6g024770 I 0.847
AT1G50680 Arabidopsis thaliana AT1G50680 I 0.837
Carubv10011257m.g Capsella rubella Carubv10011257m.g I 0.806
Bra030458 Brassica rapa Bra030458 I 0.781
Cagra.2093s0004 Capsella grandiflora Cagra.2093s0004 I 0.765
Carubv10011592m.g Capsella rubella Carubv10011592m.g I 0.765
Bo5g081270 Brassica oleracea Bo5g081270 I 0.760
Bo6g022450 Brassica oleracea Bo6g022450 I 0.745
Thhalv10012161m.g Eutrema salsugineum Thhalv10012161m.g I 0.745
TCM_040397 Theobroma cacao TCM_040397 I 0.731
Bo6g022280 Brassica oleracea Bo6g022280 I 0.726
Bra018869 Brassica rapa Bra018869 I 0.720
Cucsa.142990 Cucumis sativus Cucsa.142990 I 0.710
Cla004867 Citrullus lanatus Cla004867 I 0.705
Bra018854 Brassica rapa Bra018854 I 0.701