Bostr.25219s0556 (Boechera stricta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Bostr.25219s0556 T022656_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G60130
M06712_2.00 		Arabidopsis thaliana
WTTTBCTTNDNWTTTBCTT
AAGVAAAWNHNAAGVAAAW		 Dap-seq
OMalley et al.(2016)
AT5G60130_col_a 		0.733 0.733
AT5G60130
M06713_2.00 		Arabidopsis thaliana
DTTTTSCTTAWNTTTTGCTTA
TAAGCAAAANWTAAGSAAAAH		 Dap-seq
OMalley et al.(2016)
AT5G60130_colamp_a 		0.733 0.733
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25219s0556.1.p B3 18 61
Bostr.25219s0556.1.p B3 123 220

Links

Other B3 family TFs
Other Boechera stricta TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10027909m.g Capsella rubella Carubv10027909m.g N 0.785
Cagra.1317s0003 Capsella grandiflora Cagra.1317s0003 N 0.785
scaffold_802655.1 Arabidopsis lyrata scaffold_802655.1 I 0.756
AT5G60130 Arabidopsis thaliana AT5G60130 D 0.733