Cagra.24523s0002 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.24523s0002 T022783_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.24523s0002.1.p B3 15 72

Links

Other B3 family TFs
Other Capsella grandiflora TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.20129s0222 Boechera stricta Bostr.20129s0222 N 0.880
Carubv10019991m.g Capsella rubella Carubv10019991m.g N 0.840
Cagra.0096s0050 Capsella grandiflora Cagra.0096s0050 N 0.840
Bra015651 Brassica rapa Bra015651 N 0.800
Thhalv10018331m.g Eutrema salsugineum Thhalv10018331m.g N 0.800
Bo6g121520 Brassica oleracea Bo6g121520 N 0.800
SapurV1A.0331s0130 Salix purpurea SapurV1A.0331s0130 I 0.780
POPTR_0005s16320 Populus trichocarpa POPTR_0005s16320 I 0.780
POPTR_0002s09050 Populus trichocarpa POPTR_0002s09050 I 0.780
cassava36161.valid.m1 Manihot esculenta cassava36161.valid.m1 I 0.780
ARF17 Arabidopsis lyrata scaffold_202748.1 N 0.780
SapurV1A.0010s0540 Salix purpurea SapurV1A.0010s0540 I 0.760
evm.TU.supercontig_49.122 Carica papaya evm.TU.supercontig_49.122 I 0.760
Gorai.009G241900 Gossypium raimondii Gorai.009G241900 I 0.740
Pm019126 Prunus mume Pm019126 I 0.720
Gorai.010G046000 Gossypium raimondii Gorai.010G046000 I 0.720
MDP0000232116 Malus domestica MDP0000232116 N 0.720
Ciclev10000693m.g Citrus clementina Ciclev10000693m.g I 0.700
MTR_3g073420 Medicago truncatula MTR_3g073420 N 0.700
orange1.1g008078m.g Citrus sinensis orange1.1g008078m.g I 0.700