CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA032378
(
Oryza indica
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
BGIOSGA032378
T024525_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA032378-PA
BBR
1
342
MDDDASMSIRWGGFFESPARNLGLQLMSSVPADRDTKQLLSGSPFLHHQHQQQHVPHHHHQPHHPRDCGANGNANGGAMPPPPATEAPPSMPMNFVRSDMWMHPQQQQQHHHPREHKVLHNLTVGHGSSHIAHHDPVGYGMIPGTHTLQMMQQQTEPQPQPPPPPQQPKEECISSPLIEENVPVIDEPPPPKKRQQGRQPKVPRAKKPKKSAAPREDGAPPNAPAPRRRGPRKNIGMVINGIDLDLSRIPTPVCSCTGAPQQCYRWGAGGWQSACCTTTISTYPLPMSTKRRGARIAGRKMSHGAFKKVLEKLAGEGYNLNNPIDLKTFWAKHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Oryza indica
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA10G01080
Oryza nivara
ONIVA10G01080
N
1.000
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
BGIOSGA032380
Oryza indica
BGIOSGA032380
N
0.993
OBART10G00640
Oryza barthii
OBART10G00640
N
0.993
OGLUM10G00620
Oryza glumaepatula
OGLUM10G00620
N
0.976
OGLUM10G00630
Oryza glumaepatula
OGLUM10G00630
N
0.972
ORUFI10G00640
Oryza rufipogon
ORUFI10G00640
N
0.969
OS10G0115200
Oryza sativa
OS10G0115200
N
0.969
OS10G0114500
Oryza sativa
OS10G0114500
N
0.969
OLONG_022525
Oryza longistaminata
OLONG_022525
N
0.957
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.949
OPUNC03G13410
Oryza punctata
OPUNC03G13410
N
0.917
OPUNC10G00600
Oryza punctata
OPUNC10G00600
N
0.903
LPERR10G00500
Leersia perrieri
LPERR10G00500
N
0.845
LPERR10G00510
Leersia perrieri
LPERR10G00510
N
0.845
OB10G10530
Oryza brachyantha
OB10G10530
N
0.841
OB10G10650
Oryza brachyantha
OB10G10650
N
0.832
OMERI10G00690
Oryza meridionalis
OMERI10G00690
N
0.830
ONIVA10G01090
Oryza nivara
ONIVA10G01090
N
0.812
ORUFI10G00650
Oryza rufipogon
ORUFI10G00650
N
0.767
OS10G0115500
Oryza sativa
OS10G0115500
N
0.766
BRADI3G21380
Brachypodium distachyon
BRADI3G21380
N
0.757
OGLUM10G00640
Oryza glumaepatula
OGLUM10G00640
N
0.756
OBART10G00650
Oryza barthii
OBART10G00650
N
0.753
BRADI3G21390
Brachypodium distachyon
BRADI3G21390
N
0.739
OS03G0237401
Oryza sativa
OS03G0237401
N
0.735
Si036337m.g
Setaria italica
Si036337m.g
N
0.724
GRMZM2G166230
Zea mays
GRMZM2G166230
N
0.710
Pavir.Ia04968
Panicum virgatum
Pavir.Ia04968
N
0.707
Traes_4AS_48979CBE1
Triticum aestivum
Traes_4AS_48979CBE1
N
0.705
MLOC_13459
Hordeum vulgare
MLOC_13459
N
0.702
Traes_4DL_AE5093871
Triticum aestivum
Traes_4DL_AE5093871
N
0.701
Si029480m.g
Setaria italica
Si029480m.g
N
0.701
F775_06914
Aegilops tauschii
F775_06914
N
0.701