Gorai.002G124900 (Gossypium raimondii)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Gorai.002G124900 T024857_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BPC6
M06719_2.00
Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG

CTCTCTCTCTCTCTCTCTCTM
Dap-seq
OMalley et al.(2016)
BPC6_col_a
0.716 0.716
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.002G124900.1 BBR 1 336
Gorai.002G124900.2 BBR 1 336
Gorai.002G124900.3 BBR 1 326
Gorai.002G124900.4 BBR 1 326
Gorai.002G124900.5 BBR 1 326
Gorai.002G124900.6 BBR 1 336
Gorai.002G124900.7 BBR 1 336

Links

Other BBR family TFs
Other Gossypium raimondii TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003881 Calypte anna Aan_R003881 I 0.000
Afo_R009175 Aptenodytes forsteri Afo_R009175 I 0.000
Alligator_sinensis_CCG006627.1 Alligator sinensis Alligator_sinensis_CCG006627.1 I 0.000
Brh_R007445 Buceros rhinoceros Brh_R007445 I 0.000
Cmyd_10020158 Chelonia mydas Cmyd_10020158 I 0.000
SALL1 Anolis carolinensis ENSACAG00000014399 I 0.000
ENSAMEG00000006817 Ailuropoda melanoleuca ENSAMEG00000006817 I 0.000
ENSAMXG00000018599 Astyanax mexicanus ENSAMXG00000018599 I 0.000
ENSAPLG00000003356 Anas platyrhynchos ENSAPLG00000003356 I 0.000
SALL1 Bos taurus ENSBTAG00000008544 I 0.000
ENSBTAP00000011264-D1 Bos grunniens ENSBTAP00000011264-D1 I 0.000
SALL1 Canis familiaris ENSCAFG00000009755 I 0.000
SALL1 Callithrix jacchus ENSCJAG00000001740 I 0.000
sall1a Danio rerio ENSDARG00000074319 I 0.000
SALL1 Dasypus novemcinctus ENSDNOG00000016413 I 0.000
ENSDORG00000004249 Dipodomys ordii ENSDORG00000004249 I 0.000
SALL1 Equus caballus ENSECAG00000011334 I 0.000
SALL1 Erinaceus europaeus ENSEEUG00000002014 I 0.000
SALL1 Echinops telfairi ENSETEG00000015150 I 0.000
ENSFALG00000000074 Ficedula albicollis ENSFALG00000000074 I 0.000
SALL1 Homo sapiens ENSG00000103449 I 0.000
ENSGALG00000003739 Gallus gallus ENSGALG00000003739 I 0.000
SALL1 Gorilla gorilla ENSGGOG00000000663 I 0.000
ENSGMOG00000006103 Gadus morhua ENSGMOG00000006103 I 0.000
ENSLACG00000003556 Latimeria chalumnae ENSLACG00000003556 I 0.000
SALL1 Loxodonta africana ENSLAFG00000015251 I 0.000
ENSMEUG00000012206 Macropus eugenii ENSMEUG00000012206 I 0.000
SALL1 Meleagris gallopavo ENSMGAG00000004704 I 0.000
SALL1 Myotis lucifugus ENSMLUG00000015541 I 0.000
SALL1 Monodelphis domestica ENSMODG00000013114 I 0.000
ENSMPUG00000003265 Mustela putorius furo ENSMPUG00000003265 I 0.000
Sall1 Mus musculus ENSMUSG00000031665 D 0.000
SALL1 Oryctolagus cuniculus ENSOCUG00000004364 I 0.000
ENSP00000251020 Macaca fascicularis ENSP00000251020 I 0.000
ENSPPYG00000007345 Pongo abelii ENSPPYG00000007345 I 0.000
ENSPSIG00000008582 Pelodiscus sinensis ENSPSIG00000008582 I 0.000
SALL1 Pan troglodytes ENSPTRG00000008108 I 0.000
SALL1 Sorex araneus ENSSARG00000000661 I 0.000
ENSSHAG00000009477 Sarcophilus harrisii ENSSHAG00000009477 I 0.000
SALL1 Sus scrofa ENSSSCG00000002836 I 0.000
ENSSTOG00000020885 Ictidomys tridecemlineatus ENSSTOG00000020885 I 0.000
SALL1 Taeniopygia guttata ENSTGUG00000007514 I 0.000
Gfo_R010713 Geospiza fortis Gfo_R010713 I 0.000
Pvit_15502 Pogona vitticeps Pvit_15502 I 0.000
Tal_R006196 Tyto alba Tal_R006196 I 0.000