Pavir.J07775 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J07775 T028549_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J07775.1.p BED ZF 28 77
Pavir.J07775.2.p BED ZF 28 77

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ia00276 Panicum virgatum Pavir.Ia00276 N 1.000
Si038722m.g Setaria italica Si038722m.g N 0.977
Sb01g003040 Sorghum bicolor Sb01g003040 N 0.953
MLOC_64929 Hordeum vulgare MLOC_64929 N 0.930
Traes_5BL_1FA8B5075 Triticum aestivum Traes_5BL_1FA8B5075 N 0.930
ORGLA03G0360400 Oryza glaberrima ORGLA03G0360400 N 0.907
OS03G0822900 Oryza sativa OS03G0822900 N 0.907
BGIOSGA013845 Oryza indica BGIOSGA013845 N 0.907
BRADI1G03570 Brachypodium distachyon BRADI1G03570 N 0.907
OB03G46220 Oryza brachyantha OB03G46220 N 0.860
GSMUA_Achr9G03400_001 Musa acuminata GSMUA_Achr9G03400_001 N 0.791