CGI_10004108 (Crassostrea gigas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 CGI_10004108 T032084_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Srebf1
M00754_2.00 		Mus musculus
VWCAYVYSAB
VTSRBRTGWB		 PBM
Weirauch et al.(2013)
pTH0914 		0.866 0.843
Srebf1
M01724_2.00 		Mus musculus
RWCAYVYBD
HVRBRTGWY		 PBM
Weirauch et al.(2014)
pTH5161 		0.866 0.843
Srebf1
M02816_2.00 		Mus musculus
RTCACGTGAY
RTCACGTGAY		 SELEX
Jolma et al.(2013)
Srebf1_1 		0.866 0.843
SREBF1
M04062_2.00 		Homo sapiens
VHCACVCSAY
RTSGBGTGDB		 SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_1 		0.866 0.843
SREBF1
M04063_2.00 		Homo sapiens
VHCRCGYGDB
VHCRCGYGDB		 SELEX
Yin et al.(2017)
SREBF1_eDBD_HT-SELEX_2 		0.866 0.843
SREBF1
M08048_2.00 		Homo sapiens
VTCACSCCAY
RTGGSGTGAB		 ChIP-seq
Mathelier et al.(2014)
MA0595.1 		0.866 0.843
SREBF1
M08711_2.00 		Homo sapiens
VTCACVYSAYH
DRTSRBGTGAB		 Misc
Kulakovskiy et al.(2013)
SRBP1_HUMAN.H11MO.0.A 		0.866 0.843
Srebf1
M08749_2.00 		Mus musculus
VTCASSYSABN
NVTSRSSTGAB		 Misc
Kulakovskiy et al.(2013)
SRBP1_MOUSE.H11MO.0.B 		0.866 0.843
SREBF1
M09796_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBF1_02 		0.866 0.843
SREBF1
M09797_2.00 		Homo sapiens
NATCACGTGAB
VTCACGTGATN		 Transfac
Matys et al.(2006)
V$SREBP1_01 		0.866 0.843
SREBF1
M09798_2.00 		Homo sapiens
KRTCACCCCAC
GTGGGGTGAYM		 Transfac
Matys et al.(2006)
V$SREBP1_02 		0.866 0.843
SREBF1
M09799_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBP1_Q5 		0.866 0.843
SREBF1
M09800_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBP1_Q6_01 		0.866 0.843
SREBF1
M09801_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREBP1_Q6 		0.866 0.843
SREBF1
M04064_2.00 		Homo sapiens
MTCACVCCAY
RTGGBGTGAK		 SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_1 		0.866 0.843
SREBF1
M04065_2.00 		Homo sapiens
RTCACCTGAY
RTCAGGTGAY		 SELEX
Yin et al.(2017)
SREBF1_eDBD_Methyl-HT-SELEX_2 		0.866 0.843
HLH106
M03626_2.00 		Drosophila melanogaster
RTCACGTGAY
RTCACGTGAY		 SELEX
Nitta et al.(2015)
HLH106_1 		0.866 0.686
HLH106
M03627_2.00 		Drosophila melanogaster
NRTCACGCCAYH
DRTGGCGTGAYN		 SELEX
Nitta et al.(2015)
HLH106_2 		0.866 0.686
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC21309 bHLH 228 278

Links

Other bHLH family TFs
Other Crassostrea gigas TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LotgiG224211 Lottia gigantea LotgiG224211 I 0.890
CapteG165299 Capitella teleta CapteG165299 I 0.879
HelroG66987 Helobdella robusta HelroG66987 I 0.872
ENSXMAG00000014774 Xiphophorus maculatus ENSXMAG00000014774 I 0.866
srebf1 Tetraodon nigroviridis ENSTNIG00000011957 I 0.866
SREBF1 Taeniopygia guttata ENSTGUG00000007313 I 0.866
SREBP Drosophila grimshawi FBgn0122129 I 0.866
SREBP Drosophila erecta FBgn0108291 I 0.866
SREBP Drosophila pseudoobscura FBgn0081122 I 0.866
ENSSTOG00000014939 Ictidomys tridecemlineatus ENSSTOG00000014939 I 0.866
SREBP Drosophila ananassae FBgn0100584 I 0.866
ENSSSCG00000023124 Sus scrofa ENSSSCG00000023124 I 0.866
SREBF1 Procavia capensis ENSPCAG00000014903 I 0.866
ENSPANG00000023675 Papio anubis ENSPANG00000023675 I 0.866
srebf1 Oryzias latipes ENSORLG00000009437 I 0.866
ENSPFOG00000010306 Poecilia formosa ENSPFOG00000010306 I 0.866
ENSPPYG00000008037 Pongo abelii ENSPPYG00000008037 I 0.866
ENSSHAG00000018607 Sarcophilus harrisii ENSSHAG00000018607 I 0.866
Srebf1 Rattus norvegicus ENSRNOG00000003463 I 0.866
SREBF1 Pteropus vampyrus ENSPVAG00000005765 I 0.866
SREBP Drosophila sechellia FBgn0174544 I 0.866
SREBP Drosophila willistoni FBgn0219495 I 0.866
Gfo_R006283 Geospiza fortis Gfo_R006283 I 0.866
ENSP00000348069 Macaca fascicularis ENSP00000348069 I 0.866
Alligator_sinensis_CCG012315.1 Alligator sinensis Alligator_sinensis_CCG012315.1 I 0.866
Myotis_brandtii_SREBF1_10023215 Myotis brandtii Myotis_brandtii_SREBF1_10023215 I 0.866
Ogr11708 Ophisaurus gracilis Ogr11708 I 0.866
XP_002944649 Xenopus tropicalis XP_002944649 I 0.866
srebf1 Xenopus tropicalis XB-GENE-987572 I 0.866
Pvit_05020 Pogona vitticeps Pvit_05020 I 0.866
Aan_R009070 Calypte anna Aan_R009070 I 0.866
YQE_07365 Dendroctonus ponderosae YQE_07365 I 0.866
SREBP Drosophila yakuba FBgn0236960 I 0.866
SREBF1 Ochotona princeps ENSOPRG00000015069 I 0.866
SREBP Drosophila virilis FBgn0198580 I 0.866
HLH106 Drosophila melanogaster FBgn0261283 D 0.866
MESCA001239 Megaselia scalaris MESCA001239 I 0.866
tetur08g03870 Tetranychus urticae tetur08g03870 I 0.866
NV10553 Nasonia vitripennis NV10553 I 0.866
SREBP Drosophila simulans FBgn0186498 I 0.866
SREBP Drosophila persimilis FBgn0153336 I 0.866
SREBF1 Equus caballus ENSECAG00000019802 I 0.866
Srebf1 Dipodomys ordii ENSDORG00000012333 I 0.866
srebf1 Danio rerio ENSDARG00000067607 I 0.866
SREBF1 Echinops telfairi ENSETEG00000004179 I 0.866
ENSFALG00000013762 Ficedula albicollis ENSFALG00000013762 I 0.866
SREBF1 Homo sapiens ENSG00000072310 D 0.866
SREBF1 Felis catus ENSFCAG00000001983 I 0.866
ENSCSAG00000008412 Chlorocebus sabaeus ENSCSAG00000008412 I 0.866
SREBF1 Cavia porcellus ENSCPOG00000002439 I 0.866
ENSAMEG00000005129 Ailuropoda melanoleuca ENSAMEG00000005129 I 0.866
SREBF1 Anolis carolinensis ENSACAG00000001181 I 0.866
ENSONIG00000002304 Oreochromis niloticus ENSONIG00000002304 I 0.866
SREBF1 Bos taurus ENSBTAG00000007884 I 0.866
SREBF1 Callithrix jacchus ENSCJAG00000008953 I 0.866
SREBF1 Canis familiaris ENSCAFG00000018436 I 0.866
srebf1 Gasterosteus aculeatus ENSGACG00000012064 I 0.866
ENSAMXG00000009016 Astyanax mexicanus ENSAMXG00000009016 I 0.866
Srebf1 Mus musculus ENSMUSG00000020538 D 0.866
ENSMPUG00000000024 Mustela putorius furo ENSMPUG00000000024 I 0.866
SREBF1 Monodelphis domestica ENSMODG00000014074 I 0.866
ENSNLEG00000013625 Nomascus leucogenys ENSNLEG00000013625 I 0.866
ENSOARG00000001504 Ovis aries ENSOARG00000001504 I 0.866
SREBF1 Gallus gallus ENSGALG00000027188 I 0.866
SREBF1 Otolemur garnettii ENSOGAG00000002910 I 0.866
SREBF1 Macaca mulatta ENSMMUG00000023375 I 0.866
SREBF1 Ornithorhynchus anatinus ENSOANG00000012278 I 0.866
ENSLOCG00000008766 Lepisosteus oculatus ENSLOCG00000008766 I 0.866
ENSLACG00000013149 Latimeria chalumnae ENSLACG00000013149 I 0.866
SREBF1 Loxodonta africana ENSLAFG00000021644 I 0.866
SREBF1 Microcebus murinus ENSMICG00000012535 I 0.866
SREBF1 Gorilla gorilla ENSGGOG00000002713 I 0.866
ENSMEUG00000001306 Macropus eugenii ENSMEUG00000001306 I 0.866
SMAR011485 Strigamia maritima SMAR011485 I 0.864
SINV16629 Solenopsis invicta SINV16629 I 0.864
L798_14382 Zootermopsis nevadensis L798_14382 I 0.864
ACYPI005432 Acyrthosiphon pisum ACYPI005432 I 0.864
Hsal_02671--XP_396866.3_APIME Harpegnathos saltator Hsal_02671--XP_396866.3_APIME I 0.864
GB54953 Apis mellifera GB54953 I 0.864
ENSPSIG00000005996 Pelodiscus sinensis ENSPSIG00000005996 I 0.863
BGIBMGA001211 Bombyx mori BGIBMGA001211 I 0.861
KGM_21476 Danaus plexippus KGM_21476 I 0.861
HMEL008680 Heliconius melpomene HMEL008680 I 0.861
Ocbimv22024635m.g Octopus bimaculoides Ocbimv22024635m.g I 0.858
LCUP004742 Lucilia cuprina LCUP004742 I 0.855
MDOA000648 Musca domestica MDOA000648 I 0.855
Cmyd_10008393 Chelonia mydas Cmyd_10008393 I 0.850
PPAI004928 Phlebotomus papatasi PPAI004928 I 0.849
HCOI01299300 Haemonchus contortus HCOI01299300 I 0.848
ANCCAN_02634 Ancylostoma caninum ANCCAN_02634 I 0.848
ANCCEY_06558 Ancylostoma ceylanicum ANCCEY_06558 I 0.848
HCOI02041100 Haemonchus contortus HCOI02041100 I 0.848
DICVIV_05621 Dictyocaulus viviparus DICVIV_05621 I 0.848
NECAME_14255 Necator americanus NECAME_14255 I 0.848
TELCIR_07862 Teladorsagia circumcincta TELCIR_07862 I 0.848
NBR_0002173001 Nippostrongylus brasiliensis NBR_0002173001 I 0.848
TELCIR_06021 Teladorsagia circumcincta TELCIR_06021 I 0.848
HelroG138368 Helobdella robusta HelroG138368 I 0.846
SREBP Drosophila mojavensis FBgn0134398 I 0.845
AMIN002144 Anopheles minimus AMIN002144 I 0.843
AMEM008702 Anopheles merus AMEM008702 I 0.843
AQUA008327 Anopheles quadriannulatus AQUA008327 I 0.843
ASIS002143 Anopheles sinensis ASIS002143 I 0.843
ASTEI06218 Anopheles stephensi ASTEI06218 I 0.843
AMEC015010 Anopheles melas AMEC015010 I 0.843
ADAC008255 Anopheles darlingi ADAC008255 I 0.843
AALB006631 Anopheles albimanus AALB006631 I 0.843
AARA001097 Anopheles arabiensis AARA001097 I 0.843
AAEL010555 Aedes aegypti AAEL010555 I 0.843
AGAP000076 Anopheles gambiae AGAP000076 I 0.843
CpipJ_CPIJ018167 Culex pipiens CpipJ_CPIJ018167 I 0.843
CPIJ018167 Culex quinquefasciatus CPIJ018167 I 0.843
AATE001073 Anopheles atroparvus AATE001073 I 0.843
ACHR009884 Anopheles christyi ACHR009884 I 0.843
AFAF018960 Anopheles farauti AFAF018960 I 0.843
AFUN011560 Anopheles funestus AFUN011560 I 0.843
AEPI007594 Anopheles epiroticus AEPI007594 I 0.843
ADIR000987 Anopheles dirus ADIR000987 I 0.843
ACOM033566 Anopheles coluzzii ACOM033566 I 0.843
ACUA020889 Anopheles culicifacies ACUA020889 I 0.843
AMAM021165 Anopheles maculatus AMAM021165 I 0.843
TC007163 Tribolium castaneum TC007163 I 0.840