Atoh1 (Mus musculus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSMUSG00000073043 T035754_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atoh1
M01754_2.00		 Mus musculus
NMCATATGKN
NMCATATGKN		 PBM
Weirauch et al.(2014)
pTH5074		 (Direct) (Direct)
Atoh1
M02820_2.00		 Mus musculus
RMCATATGBY
RVCATATGKY		 SELEX
Jolma et al.(2013)
Atoh1_1		 (Direct) (Direct)
Atoh1
M08779_2.00		 Mus musculus
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_MOUSE.H11MO.0.B		 (Direct) (Direct)
Atoh1
M09480_2.00		 Mus musculus
NNRVCAKMTGBY
RVCAKMTGBYNN		 Misc
Heinz et al.(2010)
Cerebellum-Atoh1_GSE22111		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATOH1
M04166_2.00 		Homo sapiens
RACAGCTGYY
RRCAGCTGTY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_1 		0.914 1.000
ATOH1
M04167_2.00 		Homo sapiens
RVCATATGBY
RVCATATGBY		 SELEX
Yin et al.(2017)
ATOH1_eDBD_HT-SELEX_2 		0.914 1.000
ATOH1
M08738_2.00 		Homo sapiens
RRCAGMTGG
CCAKCTGYY		 Misc
Kulakovskiy et al.(2013)
ATOH1_HUMAN.H11MO.0.B 		0.914 1.000
ATOH1
M09877_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MATH1_Q2 		0.914 1.000
ATOH1
M04168_2.00 		Homo sapiens
AACAGCTGTY
RACAGCTGTT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
ATOH1
M04169_2.00 		Homo sapiens
AVCATATGBY
RVCATATGBT		 SELEX
Yin et al.(2017)
ATOH1_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01754_2.00 bHLH 16 68

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000098903 bHLH 157 209

Links

Other bHLH family TFs
Other Mus musculus TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATOH1 Bos taurus ENSBTAG00000002895 I 0.914
ATOH1 Canis familiaris ENSCAFG00000010016 I 0.914
ATOH1 Choloepus hoffmanni ENSCHOG00000000748 I 0.914
ATOH1 Callithrix jacchus ENSCJAG00000022028 I 0.914
ENSCSAG00000000408 Chlorocebus sabaeus ENSCSAG00000000408 I 0.914
ATOH1 Dasypus novemcinctus ENSDNOG00000018799 I 0.914
ATOH1 Equus caballus ENSECAG00000001213 I 0.914
ATOH1 Echinops telfairi ENSETEG00000019807 I 0.914
ATOH1 Homo sapiens ENSG00000172238 D 0.914
ATOH1 Gorilla gorilla ENSGGOG00000001096 I 0.914
ENSLAFG00000023246 Loxodonta africana ENSLAFG00000023246 I 0.914
ENSMEUG00000009664 Macropus eugenii ENSMEUG00000009664 I 0.914
ATOH1 Myotis lucifugus ENSMLUG00000008044 I 0.914
ATOH1 Macaca mulatta ENSMMUG00000002367 I 0.914
ATOH1 Monodelphis domestica ENSMODG00000019270 I 0.914
ENSMPUG00000019092 Mustela putorius furo ENSMPUG00000019092 I 0.914
ENSNLEG00000018621 Nomascus leucogenys ENSNLEG00000018621 I 0.914
ATOH1 Oryctolagus cuniculus ENSOCUG00000013154 I 0.914
ATOH1 Otolemur garnettii ENSOGAG00000030783 I 0.914
ATOH1 Ochotona princeps ENSOPRG00000008973 I 0.914
ENSPANG00000000252 Papio anubis ENSPANG00000000252 I 0.914
ENSPPYG00000015283 Pongo abelii ENSPPYG00000015283 I 0.914
ATOH1 Pan troglodytes ENSPTRG00000031141 I 0.914
Atoh1 Rattus norvegicus ENSRNOG00000006383 I 0.914
ENSSHAG00000009094 Sarcophilus harrisii ENSSHAG00000009094 I 0.914
ATOH1 Sus scrofa ENSSSCG00000009196 I 0.914
ENSSTOG00000009183 Ictidomys tridecemlineatus ENSSTOG00000009183 I 0.914
ATOH1 Tupaia belangeri ENSTBEG00000003291 I 0.914
ENSBTAP00000003762-D1 Bos grunniens ENSBTAP00000003762-D1 I 0.914
ENSP00000302216 Macaca fascicularis ENSP00000302216 I 0.914
Myotis_brandtii_ATOH1_10005345 Myotis brandtii Myotis_brandtii_ATOH1_10005345 I 0.914
XP_002937284 Xenopus tropicalis XP_002937284 I 0.914
ENSLACG00000005491 Latimeria chalumnae ENSLACG00000005491 I 0.890
atoh1a Danio rerio ENSDARG00000055294 I 0.884
ENSLOCG00000017552 Lepisosteus oculatus ENSLOCG00000017552 I 0.884
ENSLACG00000013212 Latimeria chalumnae ENSLACG00000013212 I 0.868
ENSONIG00000015058 Oreochromis niloticus ENSONIG00000015058 I 0.860
atoh1a Oryzias latipes ENSORLG00000004876 I 0.860
ENSPFOG00000019101 Poecilia formosa ENSPFOG00000019101 I 0.860
atoh1a Tetraodon nigroviridis ENSTNIG00000017584 I 0.860
atoh1a Takifugu rubripes ENSTRUG00000012647 I 0.860
ENSXMAG00000015349 Xiphophorus maculatus ENSXMAG00000015349 I 0.860
ENSAMXG00000003022 Astyanax mexicanus ENSAMXG00000003022 I 0.842
atoh1b Danio rerio ENSDARG00000099564 I 0.842
ENSLOCG00000011944 Lepisosteus oculatus ENSLOCG00000011944 I 0.842
ENSONIG00000017784 Oreochromis niloticus ENSONIG00000017784 I 0.842
ENSPFOG00000023785 Poecilia formosa ENSPFOG00000023785 I 0.842
ENSXMAG00000009786 Xiphophorus maculatus ENSXMAG00000009786 I 0.842
ENSGMOG00000019019 Gadus morhua ENSGMOG00000019019 I 0.840
Sakowv30002492m.g Saccoglossus kowalevskii Sakowv30002492m.g I 0.840
ISCW003667 Ixodes scapularis ISCW003667 I 0.838