GA15893 (Drosophila pseudoobscura)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 FBgn0075909 T038473_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HLH4C
M03609_2.00
Drosophila melanogaster
DDNCRCAGCTGYGNHH

DDNCRCAGCTGYGNHH
SELEX
Nitta et al.(2015)
HLH4C_1
0.914 1.000
HLH4C
M03610_2.00
Drosophila melanogaster
DRSMYCAGCTGVKSYH

DRSMBCAGCTGRKSYH
SELEX
Nitta et al.(2015)
HLH4C_2
0.914 1.000
HLH4C
M03611_2.00
Drosophila melanogaster
NRBMYCAGCTGYGNHH

DDNCRCAGCTGRKVYN
SELEX
Nitta et al.(2015)
HLH4C_3
0.914 1.000
HLH4C
M05963_2.00
Drosophila melanogaster
CACCTGMDCC

GGHKCAGGTG
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_3_FBgn0011277
0.914 1.000
HLH4C
M05964_2.00
Drosophila melanogaster
MCAYCTGMGMMM

KKKCKCAGRTGK
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_4_FBgn0011277
0.914 1.000
HLH4C
M05965_2.00
Drosophila melanogaster
VNHHVCACCTGMBNC

GNVKCAGGTGBDDNB
B1H
Zhu et al.(2011)
HLH4C_da_SANGER_5_FBgn0011277
0.914 1.000
HLH4C
M05966_2.00
Drosophila melanogaster
RGSMYCAGCTGCGYY

RRCGCAGCTGRKSCY
B1H
Zhu et al.(2011)
HLH4C_SANGER_5_FBgn0011277
0.914 1.000
NHLH1
M02796_2.00
Homo sapiens
CGCAGCTGCB

VGCAGCTGCG
SELEX
Jolma et al.(2013)
NHLH1_1
0.891 0.923
NHLH1
M02797_2.00
Homo sapiens
VGCAGCTGCK

MGCAGCTGCB
SELEX
Jolma et al.(2013)
NHLH1_2
0.891 0.923
NHLH1
M04162_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH

DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_eDBD_HT-SELEX
0.891 0.923
NHLH1
M04164_2.00
Homo sapiens
NDGNMKCAGCTGCGYCMH

DKGRCGCAGCTGMKNCHN
SELEX
Yin et al.(2017)
NHLH1_FL_HT-SELEX
0.891 0.923
Nhlh1
M08773_2.00
Mus musculus
BKGGNMNCAGCTGCGBCCYY

RRGGVCGCAGCTGNKNCCMV
Misc
Kulakovskiy et al.(2013)
HEN1_MOUSE.H11MO.0.C
0.891 0.923
NHLH1
M09875_2.00
Homo sapiens
NNDGGNMVCAGCTGVGNCCNNN

NNNGGNCBCAGCTGBKNCCHNN
Transfac
Matys et al.(2006)
V$HEN1_01
0.891 0.923
NHLH1
M09876_2.00
Homo sapiens
NDRGGVMGCAGCTGMKNCCHHN

NDDGGNMKCAGCTGCKBCCYHN
Transfac
Matys et al.(2006)
V$HEN1_02
0.891 0.923
NHLH1
M04163_2.00
Homo sapiens
NRGBMKCAGCTGCGYCCH

DGGRCGCAGCTGMKVCYN
SELEX
Yin et al.(2017)
NHLH1_eDBD_Methyl-HT-SELEX
0.891 0.923
NHLH1
M04165_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH

DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH1_FL_Methyl-HT-SELEX
0.891 0.923
Nhlh2
M00756_2.00
Mus musculus
NKCAGCTGHN

NDCAGCTGMN
PBM
Weirauch et al.(2013)
pTH3037
0.891 0.904
NHLH2
M04177_2.00
Homo sapiens
DDGNMGCAGCTGCGYCMH

DKGRCGCAGCTGCKNCHH
SELEX
Yin et al.(2017)
NHLH2_FL_HT-SELEX
0.891 0.904
NHLH2
M09878_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HEN2_Q2
0.891 0.904
NHLH2
M04178_2.00
Homo sapiens
DGGNMBCAGCTGCGYCCH

DGGRCGCAGCTGVKNCCH
SELEX
Yin et al.(2017)
NHLH2_FL_Methyl-HT-SELEX
0.891 0.904
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0275568 bHLH 110 162

Links

Other bHLH family TFs
Other Drosophila pseudoobscura TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Arnt Mus musculus ENSMUSG00000015522 D 0.000
tgo Drosophila melanogaster FBgn0264075 D 0.000
ARNT Homo sapiens ENSG00000143437 D 0.000
tetur01g08330 Tetranychus urticae tetur01g08330 I 0.000
Afo_R007655 Aptenodytes forsteri Afo_R007655 I 0.000
Alligator_sinensis_CCG020663.1 Alligator sinensis Alligator_sinensis_CCG020663.1 I 0.000
Cmyd_10007604 Chelonia mydas Cmyd_10007604 I 0.000
ENSBTAP00000028023-D1 Bos grunniens ENSBTAP00000028023-D1 I 0.000
ENSP00000351407 Macaca fascicularis ENSP00000351407 I 0.000
Gfo_R011690 Geospiza fortis Gfo_R011690 I 0.000
Myotis_brandtii_ARNT_10031836 Myotis brandtii Myotis_brandtii_ARNT_10031836 I 0.000
Pvit_04978 Pogona vitticeps Pvit_04978 I 0.000
Tal_R007034 Tyto alba Tal_R007034 I 0.000
estExt_fgenesh2_pg.C_1460068 Branchiostoma floridae estExt_fgenesh2_pg.C_1460068 I 0.000
Ocbimv22015061m.g Octopus bimaculoides Ocbimv22015061m.g I 0.000
TC004710 Tribolium castaneum TC004710 I 0.000
SINV17691 Solenopsis invicta SINV17691 I 0.000
GL12493 Drosophila persimilis FBgn0150099 I 0.000
GM26289 Drosophila sechellia FBgn0181143 I 0.000
GD20825 Drosophila simulans FBgn0192287 I 0.000
GJ10876 Drosophila virilis FBgn0198144 I 0.000
GK11420 Drosophila willistoni FBgn0213431 I 0.000
GE24803 Drosophila yakuba FBgn0241904 I 0.000
RPRC004351 Rhodnius prolixus RPRC004351 I 0.000
HMEL013329 Heliconius melpomene HMEL013329 I 0.000
ISCW023999 Ixodes scapularis ISCW023999 I 0.000
KGM_04621 Danaus plexippus KGM_04621 I 0.000
MCINX011636 Melitaea cinxia MCINX011636 I 0.000
NV11924 Nasonia vitripennis NV11924 I 0.000
PHUM505970 Pediculus humanus PHUM505970 I 0.000
GI10175 Drosophila mojavensis FBgn0132941 I 0.000
Sakowv30011795m.g Saccoglossus kowalevskii Sakowv30011795m.g I 0.000
AMEC017008 Anopheles melas AMEC017008 I 0.000
AQUA011339 Anopheles quadriannulatus AQUA011339 I 0.000
BGLB009342 Biomphalaria glabrata BGLB009342 I 0.000
LLOJ003291 Lutzomyia longipalpis LLOJ003291 I 0.000
MDOA015409 Musca domestica MDOA015409 I 0.000
A_03374 Schistosoma haematobium A_03374 I 0.000
D915_11353 Fasciola hepatica D915_11353 I 0.000
ECANG7_07095 Echinococcus canadensis ECANG7_07095 I 0.000
ECPE_0000540401 Echinostoma caproni ECPE_0000540401 I 0.000
MCOS_0000389001 Mesocestoides corti MCOS_0000389001 I 0.000
PXEA_0001988401 Protopolystoma xenopodis PXEA_0001988401 I 0.000
SMTD_0000012501 Schistosoma mattheei SMTD_0000012501 I 0.000
T265_03519 Opisthorchis viverrini T265_03519 I 0.000
AFUN000829 Anopheles funestus AFUN000829 I 0.000
AFAF016726 Anopheles farauti AFAF016726 I 0.000
CLEC002917 Cimex lectularius CLEC002917 I 0.000
CLEC012864 Cimex lectularius CLEC012864 I 0.000
HHAL008564-PA Halyomorpha halys HHAL008564-PA I 0.000
HHAL009348-PA Halyomorpha halys HHAL009348-PA I 0.000
LCUP007387 Lucilia cuprina LCUP007387 I 0.000
LDEC004670 Leptinotarsa decemlineata LDEC004670 I 0.000
SMU15010696 Schmidtea mediterranea SMU15010696 I 0.000
arnt.L Xenopus laevis XB-GENE-17346408 I 0.000
arnt Xenopus tropicalis XB-GENE-855450 I 0.000
arnt.S Xenopus laevis XB-GENE-866594 I 0.000
AATE014785 Anopheles atroparvus AATE014785 I 0.000
ADIR005096 Anopheles dirus ADIR005096 I 0.000
AEPI009051 Anopheles epiroticus AEPI009051 I 0.000
TRE_0001250901 Trichobilharzia regenti TRE_0001250901 I 0.000
BGIBMGA003472 Bombyx mori BGIBMGA003472 I 0.000
ARNT Echinops telfairi ENSETEG00000001280 I 0.000
ARNT Felis catus ENSFCAG00000003644 I 0.000
arnt Gasterosteus aculeatus ENSGACG00000011686 I 0.000
ARNT Gallus gallus ENSGALG00000000751 I 0.000
ARNT Gorilla gorilla ENSGGOG00000015383 I 0.000
ENSGMOG00000006058 Gadus morhua ENSGMOG00000006058 I 0.000
ARNT Loxodonta africana ENSLAFG00000011282 I 0.000
ENSMEUG00000003050 Macropus eugenii ENSMEUG00000003050 I 0.000
ARNT Meleagris gallopavo ENSMGAG00000000943 I 0.000
ARNT Microcebus murinus ENSMICG00000005872 I 0.000
ARNT Myotis lucifugus ENSMLUG00000003502 I 0.000
ARNT Macaca mulatta ENSMMUG00000000541 I 0.000
ARNT Erinaceus europaeus ENSEEUG00000007500 I 0.000
ARNT Equus caballus ENSECAG00000009602 I 0.000
ENSDORG00000014121 Dipodomys ordii ENSDORG00000014121 I 0.000
DAPPUDRAFT_309730 Daphnia pulex DAPPUDRAFT_309730 I 0.000
ARNT Anolis carolinensis ENSACAG00000011254 I 0.000
ENSAMEG00000001200 Ailuropoda melanoleuca ENSAMEG00000001200 I 0.000
ENSAPLG00000013397 Anas platyrhynchos ENSAPLG00000013397 I 0.000
ARNT Bos taurus ENSBTAG00000021037 I 0.000
ARNT Canis familiaris ENSCAFG00000012149 I 0.000
ARNT Choloepus hoffmanni ENSCHOG00000010045 I 0.000
arnt Ciona intestinalis ENSCING00000008102 I 0.000
ARNT Callithrix jacchus ENSCJAG00000006839 I 0.000
ARNT Cavia porcellus ENSCPOG00000014578 I 0.000
ENSCSAG00000018038 Chlorocebus sabaeus ENSCSAG00000018038 I 0.000
ARNT Dasypus novemcinctus ENSDNOG00000005093 I 0.000
ARNT Monodelphis domestica ENSMODG00000018814 I 0.000
ENSMPUG00000004365 Mustela putorius furo ENSMPUG00000004365 I 0.000
ENSNLEG00000009971 Nomascus leucogenys ENSNLEG00000009971 I 0.000
ENSSHAG00000012227 Sarcophilus harrisii ENSSHAG00000012227 I 0.000
ARNT Sus scrofa ENSSSCG00000006646 I 0.000
ENSSTOG00000013876 Ictidomys tridecemlineatus ENSSTOG00000013876 I 0.000
ARNT Taeniopygia guttata ENSTGUG00000004647 I 0.000
ARNT Tetraodon nigroviridis ENSTNIG00000008064 I 0.000
ARNT Takifugu rubripes ENSTRUG00000014504 I 0.000
ENSTSYG00000006074 Tarsius syrichta ENSTSYG00000006074 I 0.000
ARNT Tursiops truncatus ENSTTRG00000007388 I 0.000
ARNT Vicugna pacos ENSVPAG00000005439 I 0.000
GA11313 Drosophila pseudoobscura FBgn0071367 I 0.000
GF18433 Drosophila ananassae FBgn0095451 I 0.000
GG17399 Drosophila erecta FBgn0109625 I 0.000
ARNT Sorex araneus ENSSARG00000005490 I 0.000
Arnt Rattus norvegicus ENSRNOG00000031174 I 0.000
ARNT Pteropus vampyrus ENSPVAG00000004354 I 0.000
ARNT Ornithorhynchus anatinus ENSOANG00000004580 I 0.000
ENSOARG00000020870 Ovis aries ENSOARG00000020870 I 0.000
ARNT Oryctolagus cuniculus ENSOCUG00000013582 I 0.000
ARNT Otolemur garnettii ENSOGAG00000004523 I 0.000
ENSONIG00000006431 Oreochromis niloticus ENSONIG00000006431 I 0.000
ARNT Ochotona princeps ENSOPRG00000010374 I 0.000
ARNT Oryzias latipes ENSORLG00000010551 I 0.000
ENSPANG00000016773 Papio anubis ENSPANG00000016773 I 0.000
ARNT Procavia capensis ENSPCAG00000008485 I 0.000
ENSPPYG00000000888 Pongo abelii ENSPPYG00000000888 I 0.000
ENSPSIG00000008480 Pelodiscus sinensis ENSPSIG00000008480 I 0.000
ARNT Pan troglodytes ENSPTRG00000001266 I 0.000
GH18221 Drosophila grimshawi FBgn0125689 I 0.000
RSKR_0000723700 Rhabditophanes kr3021 RSKR_0000723700 N 0.000