CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA10G27910
(
Glycine max
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GLYMA10G27910
T039630_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
UNE10
M01705_2.00
Arabidopsis thaliana
HCACGTGM
KCACGTGD
PBM
Weirauch et al.(2014)
pTH8112
0.846
0.660
MYC2
M01699_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8083
0.842
0.460
MYC4
M01707_2.00
Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2014)
pTH8260
0.842
0.460
MYC3
M01712_2.00
Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK
PBM
Weirauch et al.(2014)
pTH8854
0.842
0.460
PK18474.1
M01127_2.00
Cannabis sativa
NRCACGTGCN
NGCACGTGYN
PBM
Lambert et al.(2019)
pTH10273
0.842
0.460
PK18474.1
M01768_2.00
Cannabis sativa
NCACGWK
MWCGTGN
PBM
Weirauch et al.(2014)
pTH9589
0.842
0.460
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA10G27910.2
bHLH
260
308
AEVHNLCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLK
GLYMA10G27910.3
bHLH
204
253
NAEVHNLCERKRRDKINKRMRILKELIPNCNKTDKASMLDDAIEYLKTLK
Links
Other
bHLH
family TFs
Other
Glycine max
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr1.CM0122.50.nc
Lotus japonicus
chr1.CM0122.50.nc
I
0.886
Ca_01053
Cicer arietinum
Ca_01053
I
0.875
GLYMA19G40980
Glycine max
GLYMA19G40980
I
0.874
GLYMA03G38391
Glycine max
GLYMA03G38391
I
0.874
MTR_7g110810
Medicago truncatula
MTR_7g110810
I
0.866
PK25041.1
Cannabis sativa
PK25041.1
I
0.866
Thhalv10000853m.g
Eutrema salsugineum
Thhalv10000853m.g
I
0.855
orange1.1g038097m.g
Citrus sinensis
orange1.1g038097m.g
I
0.853
Ciclev10019786m.g
Citrus clementina
Ciclev10019786m.g
I
0.853
SapurV1A.0321s0050
Salix purpurea
SapurV1A.0321s0050
I
0.853
30076.m004542
Ricinus communis
30076.m004542
I
0.853
Gorai.001G148300
Gossypium raimondii
Gorai.001G148300
I
0.853
Pavir.Cb01851
Panicum virgatum
Pavir.Cb01851
I
0.851
Sb09g008120
Sorghum bicolor
Sb09g008120
I
0.851
Pavir.Ca00449
Panicum virgatum
Pavir.Ca00449
I
0.851
Si021549m.g
Setaria italica
Si021549m.g
I
0.851
Carubv10001567m.g
Capsella rubella
Carubv10001567m.g
I
0.846
Ca_22883
Cicer arietinum
Ca_22883
I
0.846
gene25546-v1.0-hybrid
Fragaria vesca
gene25546-v1.0-hybrid
I
0.846
PGSC0003DMG400025976
Solanum tuberosum
PGSC0003DMG400025976
I
0.846
Bo3g042120
Brassica oleracea
Bo3g042120
I
0.846
UNE10
Arabidopsis thaliana
AT4G00050
D
0.846
UNE10
Vitis vinifera
VIT_15s0021g02690
I
0.846
POPTR_0002s14430
Populus trichocarpa
POPTR_0002s14430
I
0.846
evm.TU.supercontig_212.3
Carica papaya
evm.TU.supercontig_212.3
I
0.846
Gorai.007G088300
Gossypium raimondii
Gorai.007G088300
I
0.846
UNE10
Arabidopsis lyrata
scaffold_604304.1
I
0.846
Eucgr.D02499
Eucalyptus grandis
Eucgr.D02499
I
0.846
Solyc01g090790.2
Solanum lycopersicum
Solyc01g090790.2
I
0.846
PRUPE_ppa005629mg
Prunus persica
PRUPE_ppa005629mg
I
0.846
TCM_005607
Theobroma cacao
TCM_005607
I
0.846
Ciclev10020053m.g
Citrus clementina
Ciclev10020053m.g
I
0.846
GLYMA11G17120
Glycine max
GLYMA11G17120
I
0.846
SapurV1A.0033s0400
Salix purpurea
SapurV1A.0033s0400
I
0.846
Bra037312
Brassica rapa
Bra037312
I
0.846
orange1.1g012387m.g
Citrus sinensis
orange1.1g012387m.g
I
0.846
Bra000560
Brassica rapa
Bra000560
I
0.846
Cagra.20893s0010
Capsella grandiflora
Cagra.20893s0010
I
0.846
Bostr.14547s0014
Boechera stricta
Bostr.14547s0014
I
0.846
Thhalv10028687m.g
Eutrema salsugineum
Thhalv10028687m.g
I
0.846
Aquca_035_00175
Aquilegia coerulea
Aquca_035_00175
I
0.846
GLYMA01G32890
Glycine max
GLYMA01G32890
I
0.846
MDP0000439540
Malus domestica
MDP0000439540
I
0.846
PK20816.1
Cannabis sativa
PK20816.1
I
0.846
30174.m008814
Ricinus communis
30174.m008814
I
0.846
Bo3g054850
Brassica oleracea
Bo3g054850
I
0.846
GLYMA03G04000
Glycine max
GLYMA03G04000
I
0.846
cassava13956.valid.m1
Manihot esculenta
cassava13956.valid.m1
I
0.846
Gorai.008G106900
Gossypium raimondii
Gorai.008G106900
I
0.846
evm.TU.supercontig_65.63
Carica papaya
evm.TU.supercontig_65.63
N
0.843
Carubv10004392m.g
Capsella rubella
Carubv10004392m.g
I
0.842
Cagra.3356s0080
Capsella grandiflora
Cagra.3356s0080
I
0.842
Cagra.7865s0024
Capsella grandiflora
Cagra.7865s0024
I
0.842
Cagra.0751s0023
Capsella grandiflora
Cagra.0751s0023
I
0.842
Carubv10008586m.g
Capsella rubella
Carubv10008586m.g
I
0.842
Gorai.003G182100
Gossypium raimondii
Gorai.003G182100
I
0.842
Thhalv10007075m.g
Eutrema salsugineum
Thhalv10007075m.g
I
0.842
Thhalv10000808m.g
Eutrema salsugineum
Thhalv10000808m.g
I
0.842
Thhalv10024688m.g
Eutrema salsugineum
Thhalv10024688m.g
I
0.842
PK18474.1
Cannabis sativa
PK18474.1
D
0.842
chr2.CM0177.830.nc
Lotus japonicus
chr2.CM0177.830.nc
I
0.842
SapurV1A.0151s0080
Salix purpurea
SapurV1A.0151s0080
I
0.842
MDP0000136498
Malus domestica
MDP0000136498
I
0.842
gene10501-v1.0-hybrid
Fragaria vesca
gene10501-v1.0-hybrid
I
0.842
gene13705-v1.0-hybrid
Fragaria vesca
gene13705-v1.0-hybrid
I
0.842
Bostr.3359s0090
Boechera stricta
Bostr.3359s0090
I
0.842
MDP0000029168
Malus domestica
MDP0000029168
I
0.842
Carubv10028441m.g
Capsella rubella
Carubv10028441m.g
I
0.842
Ca_12352
Cicer arietinum
Ca_12352
I
0.842
Bra017527
Brassica rapa
Bra017527
I
0.842
Bra017523
Brassica rapa
Bra017523
I
0.842
Bra013263
Brassica rapa
Bra013263
I
0.842
Bra024998
Brassica rapa
Bra024998
I
0.842
fgenesh2_kg.7__2520__AT4G17880.1
Arabidopsis lyrata
fgenesh2_kg.7__2520__AT4G17880.1
I
0.842
GLYMA08G36720
Glycine max
GLYMA08G36720
I
0.842
GLYMA01G12740
Glycine max
GLYMA01G12740
I
0.842
GLYMA01G02251
Glycine max
GLYMA01G02251
I
0.842
Bra010178
Brassica rapa
Bra010178
I
0.842
Bo9g066680
Brassica oleracea
Bo9g066680
I
0.842
Bo01130s010
Brassica oleracea
Bo01130s010
I
0.842
MYC3
Arabidopsis thaliana
AT5G46760
D
0.842
MYC4
Arabidopsis thaliana
AT4G17880
D
0.842
Bo1g017990
Brassica oleracea
Bo1g017990
I
0.842
Bo5g086990
Brassica oleracea
Bo5g086990
I
0.842
Bo9g065530
Brassica oleracea
Bo9g065530
I
0.842
Bo8g028850
Brassica oleracea
Bo8g028850
I
0.842
Bo7g075710
Brassica oleracea
Bo7g075710
I
0.842
Bostr.30275s0255
Boechera stricta
Bostr.30275s0255
I
0.842
GLYMA09G33730
Glycine max
GLYMA09G33730
I
0.842
POPTR_0003s09090
Populus trichocarpa
POPTR_0003s09090
I
0.842
PGSC0003DMG400017535
Solanum tuberosum
PGSC0003DMG400017535
I
0.842
PRUPE_ppa002404mg
Prunus persica
PRUPE_ppa002404mg
I
0.842
Ca_09378
Cicer arietinum
Ca_09378
I
0.842
ATMYC2
Arabidopsis lyrata
scaffold_103634.1
I
0.842
Solyc08g076930.1
Solanum lycopersicum
Solyc08g076930.1
I
0.842
PGSC0003DMG400001161
Solanum tuberosum
PGSC0003DMG400001161
I
0.842
Ca_11514
Cicer arietinum
Ca_11514
I
0.842
MTR_4g097950
Medicago truncatula
MTR_4g097950
I
0.842
Bostr.28243s0060
Boechera stricta
Bostr.28243s0060
I
0.842
mgf002775m
Mimulus guttatus
mgf002775m
I
0.842
Pm023237
Prunus mume
Pm023237
I
0.842
MYC2
Arabidopsis thaliana
AT1G32640
D
0.842
MTR_5g030430
Medicago truncatula
MTR_5g030430
I
0.842
scaffold_800152.1
Arabidopsis lyrata
scaffold_800152.1
I
0.842
Eucgr.H02386
Eucalyptus grandis
Eucgr.H02386
I
0.841
MLOC_65463
Hordeum vulgare
MLOC_65463
I
0.840
Bra017520
Brassica rapa
Bra017520
I
0.839
MTR_8g067280
Medicago truncatula
MTR_8g067280
I
0.839
Gorai.004G184800
Gossypium raimondii
Gorai.004G184800
I
0.839
Lus10009261.g
Linum usitatissimum
Lus10009261.g
I
0.838
estExt_fgenesh1_pg.C_740025
Physcomitrella patens
estExt_fgenesh1_pg.C_740025
I
0.838
Lus10038020.g
Linum usitatissimum
Lus10038020.g
I
0.838
estExt_fgenesh1_pg.C_50104
Physcomitrella patens
estExt_fgenesh1_pg.C_50104
I
0.838
GLYMA02G00981
Glycine max
GLYMA02G00981
N
0.444