Lus10038020.g (Linum usitatissimum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Lus10038020.g T050281_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.839 0.440
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10038020 bHLH 297 346

Links

Other bHLH family TFs
Other Linum usitatissimum TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10009261.g Linum usitatissimum Lus10009261.g I 0.914
PK25041.1 Cannabis sativa PK25041.1 I 0.875
Eucgr.H02386 Eucalyptus grandis Eucgr.H02386 I 0.874
Ca_01053 Cicer arietinum Ca_01053 I 0.865
estExt_fgenesh1_pg.C_50104 Physcomitrella patens estExt_fgenesh1_pg.C_50104 I 0.859
estExt_fgenesh1_pg.C_740025 Physcomitrella patens estExt_fgenesh1_pg.C_740025 I 0.859
SapurV1A.0321s0050 Salix purpurea SapurV1A.0321s0050 I 0.857
30076.m004542 Ricinus communis 30076.m004542 I 0.857
orange1.1g038097m.g Citrus sinensis orange1.1g038097m.g I 0.857
Gorai.001G148300 Gossypium raimondii Gorai.001G148300 I 0.857
Ciclev10019786m.g Citrus clementina Ciclev10019786m.g I 0.857
GLYMA19G40980 Glycine max GLYMA19G40980 I 0.854
GLYMA03G38391 Glycine max GLYMA03G38391 I 0.854
Solyc04g007430.1 Solanum lycopersicum Solyc04g007430.1 N 0.844
MLOC_65463 Hordeum vulgare MLOC_65463 I 0.843
Lus10018787.g Linum usitatissimum Lus10018787.g I 0.842
Eucgr.H02385 Eucalyptus grandis Eucgr.H02385 I 0.842
e_gw1.11.52.1 Physcomitrella patens e_gw1.11.52.1 I 0.842
Lus10024871.g Linum usitatissimum Lus10024871.g I 0.842
chr1.CM0122.50.nc Lotus japonicus chr1.CM0122.50.nc I 0.841
Cla021464 Citrullus lanatus Cla021464 I 0.839
Bostr.25993s0115 Boechera stricta Bostr.25993s0115 I 0.839
Aquca_014_00031 Aquilegia coerulea Aquca_014_00031 I 0.839
Cucsa.053540 Cucumis sativus Cucsa.053540 I 0.839
Cagra.0050s0048 Capsella grandiflora Cagra.0050s0048 I 0.839
Carubv10025360m.g Capsella rubella Carubv10025360m.g I 0.839
cassava46510.m1 Manihot esculenta cassava46510.m1 I 0.839
Cla006102 Citrullus lanatus Cla006102 I 0.839
Ciclev10019339m.g Citrus clementina Ciclev10019339m.g I 0.839
mgf023325m Mimulus guttatus mgf023325m I 0.839
mgf022967m Mimulus guttatus mgf022967m I 0.839
Pm020642 Prunus mume Pm020642 I 0.839
29742.m001404 Ricinus communis 29742.m001404 I 0.839
29883.m002023 Ricinus communis 29883.m002023 I 0.839
Ciclev10019816m.g Citrus clementina Ciclev10019816m.g I 0.839
mgf001638m Mimulus guttatus mgf001638m I 0.839
mgf011621m Mimulus guttatus mgf011621m I 0.839
Pm018355 Prunus mume Pm018355 I 0.839
cassava32975.m1 Manihot esculenta cassava32975.m1 I 0.839
cassava36709.valid.m1 Manihot esculenta cassava36709.valid.m1 I 0.839
mgf018623m Mimulus guttatus mgf018623m I 0.839
Cucsa.259300 Cucumis sativus Cucsa.259300 I 0.839
gene19143-v1.0-hybrid Fragaria vesca gene19143-v1.0-hybrid I 0.839
SapurV1A.0003s1040 Salix purpurea SapurV1A.0003s1040 I 0.839
SapurV1A.0006s1070 Salix purpurea SapurV1A.0006s1070 I 0.839
Pavir.Eb00041 Panicum virgatum Pavir.Eb00041 I 0.839
Pavir.Ea00030 Panicum virgatum Pavir.Ea00030 I 0.839
orange1.1g010728m.g Citrus sinensis orange1.1g010728m.g I 0.839
orange1.1g048817m.g Citrus sinensis orange1.1g048817m.g I 0.839
SapurV1A.0013s0270 Salix purpurea SapurV1A.0013s0270 I 0.839
SapurV1A.0013s0280 Salix purpurea SapurV1A.0013s0280 I 0.839
PK29179.1 Cannabis sativa PK29179.1 I 0.839
chr1.CM0375.280.nd Lotus japonicus chr1.CM0375.280.nd I 0.839
PK00939.1 Cannabis sativa PK00939.1 I 0.839
Thhalv10001374m.g Eutrema salsugineum Thhalv10001374m.g I 0.839
SapurV1A.0378s0120 Salix purpurea SapurV1A.0378s0120 I 0.839
MDP0000406270 Malus domestica MDP0000406270 I 0.839
MDP0000401086 Malus domestica MDP0000401086 I 0.839
Ca_17639 Cicer arietinum Ca_17639 I 0.839
Gorai.007G109300 Gossypium raimondii Gorai.007G109300 I 0.839
gene13705-v1.0-hybrid Fragaria vesca gene13705-v1.0-hybrid I 0.839
gene08231-v1.0-hybrid Fragaria vesca gene08231-v1.0-hybrid I 0.839
Eucgr.K03293 Eucalyptus grandis Eucgr.K03293 I 0.839
evm.TU.contig_45808 Carica papaya evm.TU.contig_45808 I 0.839
Gorai.007G143800 Gossypium raimondii Gorai.007G143800 I 0.839
Lus10005966.g Linum usitatissimum Lus10005966.g I 0.839
MDP0000279087 Malus domestica MDP0000279087 I 0.839
MDP0000386580 Malus domestica MDP0000386580 I 0.839
MDP0000229725 Malus domestica MDP0000229725 I 0.839
MDP0000226497 Malus domestica MDP0000226497 I 0.839
Lus10030243.g Linum usitatissimum Lus10030243.g I 0.839
Eucgr.E00047 Eucalyptus grandis Eucgr.E00047 I 0.839
VIT_15s0046g00320 Vitis vinifera VIT_15s0046g00320 I 0.839
GSMUA_Achr6G35730_001 Musa acuminata GSMUA_Achr6G35730_001 I 0.839
GSMUA_Achr7G14640_001 Musa acuminata GSMUA_Achr7G14640_001 I 0.839
GSMUA_Achr8G05350_001 Musa acuminata GSMUA_Achr8G05350_001 I 0.839
GSMUA_Achr1G28110_001 Musa acuminata GSMUA_Achr1G28110_001 I 0.839
GSMUA_Achr1G14370_001 Musa acuminata GSMUA_Achr1G14370_001 I 0.839
GRMZM2G148723 Zea mays GRMZM2G148723 I 0.839
GSMUA_Achr10G22310_001 Musa acuminata GSMUA_Achr10G22310_001 I 0.839
GSMUA_Achr8G26280_001 Musa acuminata GSMUA_Achr8G26280_001 I 0.839
GSMUA_AchrUn_randomG01830_001 Musa acuminata GSMUA_AchrUn_randomG01830_001 I 0.839
MTR_7g117670 Medicago truncatula MTR_7g117670 I 0.839
MTR_8g027495 Medicago truncatula MTR_8g027495 I 0.839
MTR_7g096350 Medicago truncatula MTR_7g096350 I 0.839
MLOC_69470 Hordeum vulgare MLOC_69470 I 0.839
LPERR01G07720 Leersia perrieri LPERR01G07720 I 0.839
MLOC_33189 Hordeum vulgare MLOC_33189 I 0.839
GRMZM2G076636 Zea mays GRMZM2G076636 I 0.839
GLYMA19G44570 Glycine max GLYMA19G44570 I 0.839
Bo4g197150 Brassica oleracea Bo4g197150 I 0.839
Bra004532 Brassica rapa Bra004532 I 0.839
Bra039279 Brassica rapa Bra039279 I 0.839
Bo4g008180 Brassica oleracea Bo4g008180 I 0.839
BGIOSGA015604 Oryza indica BGIOSGA015604 I 0.839
AMTR_s00099p00127980 Amborella trichopoda AMTR_s00099p00127980 I 0.839
AIB Arabidopsis thaliana AT2G46510 I 0.839
BRADI2G08080 Brachypodium distachyon BRADI2G08080 I 0.839
F775_26406 Aegilops tauschii F775_26406 I 0.839
GLYMA13G18131 Glycine max GLYMA13G18131 I 0.839
GLYMA16G02690 Glycine max GLYMA16G02690 I 0.839
GLYMA10G03950 Glycine max GLYMA10G03950 I 0.839
GLYMA07G06090 Glycine max GLYMA07G06090 I 0.839
ATAIB Arabidopsis lyrata fgenesh2_kg.4__2868__AT2G46510.1 I 0.839
GLYMA03G41901 Glycine max GLYMA03G41901 I 0.839
Ca_12209 Cicer arietinum Ca_12209 I 0.839
OB01G18800 Oryza brachyantha OB01G18800 I 0.839
TCM_005131 Theobroma cacao TCM_005131 I 0.839
Traes_3AS_337600412 Triticum aestivum Traes_3AS_337600412 I 0.839
Traes_3B_5DC4D39A6 Triticum aestivum Traes_3B_5DC4D39A6 I 0.839
Solyc06g083980.1 Solanum lycopersicum Solyc06g083980.1 I 0.839
Solyc01g096050.2 Solanum lycopersicum Solyc01g096050.2 I 0.839
Sb03g000570 Sorghum bicolor Sb03g000570 I 0.839
Si003963m.g Setaria italica Si003963m.g I 0.839
Traes_3DS_247FA5037 Triticum aestivum Traes_3DS_247FA5037 I 0.839
Traes_4AS_D95D10893 Triticum aestivum Traes_4AS_D95D10893 I 0.839
AMTR_s00021p00226670 Amborella trichopoda AMTR_s00021p00226670 I 0.839
Ca_01324 Cicer arietinum Ca_01324 I 0.839
VIT_07s0141g01060 Vitis vinifera VIT_07s0141g01060 I 0.839
TRIUR3_13265 Triticum urartu TRIUR3_13265 I 0.839
Traes_4BL_FD0D3B74A Triticum aestivum Traes_4BL_FD0D3B74A I 0.839
Traes_4DL_DA70DBAFC Triticum aestivum Traes_4DL_DA70DBAFC I 0.839
OBART01G08590 Oryza barthii OBART01G08590 I 0.839
PRUPE_ppa008004mg Prunus persica PRUPE_ppa008004mg I 0.839
OPUNC01G08460 Oryza punctata OPUNC01G08460 I 0.839
ORGLA01G0077100 Oryza glaberrima ORGLA01G0077100 I 0.839
ORUFI01G09400 Oryza rufipogon ORUFI01G09400 I 0.839
ONIVA01G11170 Oryza nivara ONIVA01G11170 I 0.839
OMERI01G08610 Oryza meridionalis OMERI01G08610 I 0.839
OGLUM01G09830 Oryza glumaepatula OGLUM01G09830 I 0.839
OLONG_005869 Oryza longistaminata OLONG_005869 I 0.839
OS01G0235700 Oryza sativa OS01G0235700 D 0.839
PGSC0003DMG400000232 Solanum tuberosum PGSC0003DMG400000232 I 0.839
POPTR_0005s24240 Populus trichocarpa POPTR_0005s24240 I 0.839
POPTR_0014s09520 Populus trichocarpa POPTR_0014s09520 I 0.839
PRUPE_ppa002985mg Prunus persica PRUPE_ppa002985mg I 0.839
POPTR_0002s17310 Populus trichocarpa POPTR_0002s17310 I 0.839
POPTR_0002s04310 Populus trichocarpa POPTR_0002s04310 I 0.839
PGSC0003DMG400020066 Solanum tuberosum PGSC0003DMG400020066 I 0.839
GLYMA10G27910 Glycine max GLYMA10G27910 I 0.838