chr1.CM0122.50.nc (Lotus japonicus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 chr1.CM0122.50.nc T052005_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.839 0.440
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.839 0.440
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.839 0.440
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.839 0.440
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.839 0.440
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0122.50.nc bHLH 311 360

Links

Other bHLH family TFs
Other Lotus japonicus TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA10G27910 Glycine max GLYMA10G27910 I 0.886
MTR_7g110810 Medicago truncatula MTR_7g110810 I 0.881
Ca_01053 Cicer arietinum Ca_01053 I 0.877
PK25041.1 Cannabis sativa PK25041.1 I 0.874
GLYMA03G38391 Glycine max GLYMA03G38391 I 0.865
GLYMA19G40980 Glycine max GLYMA19G40980 I 0.865
Thhalv10000853m.g Eutrema salsugineum Thhalv10000853m.g I 0.851
Pavir.Ca00449 Panicum virgatum Pavir.Ca00449 I 0.848
Si021549m.g Setaria italica Si021549m.g I 0.848
Pavir.Cb01851 Panicum virgatum Pavir.Cb01851 I 0.848
Sb09g008120 Sorghum bicolor Sb09g008120 I 0.848
30076.m004542 Ricinus communis 30076.m004542 I 0.844
Gorai.001G148300 Gossypium raimondii Gorai.001G148300 I 0.844
orange1.1g038097m.g Citrus sinensis orange1.1g038097m.g I 0.844
SapurV1A.0321s0050 Salix purpurea SapurV1A.0321s0050 I 0.844
Ciclev10019786m.g Citrus clementina Ciclev10019786m.g I 0.844
Gorai.004G184800 Gossypium raimondii Gorai.004G184800 I 0.842
MTR_4g097950 Medicago truncatula MTR_4g097950 I 0.842
Ca_09378 Cicer arietinum Ca_09378 I 0.842
MTR_8g067280 Medicago truncatula MTR_8g067280 I 0.842
Lus10038020.g Linum usitatissimum Lus10038020.g I 0.841
Lus10009261.g Linum usitatissimum Lus10009261.g I 0.841
Carubv10004392m.g Capsella rubella Carubv10004392m.g I 0.839
Cagra.3356s0080 Capsella grandiflora Cagra.3356s0080 I 0.839
Bostr.30275s0255 Boechera stricta Bostr.30275s0255 I 0.839
Bostr.28243s0060 Boechera stricta Bostr.28243s0060 I 0.839
Bostr.3359s0090 Boechera stricta Bostr.3359s0090 I 0.839
Cagra.0751s0023 Capsella grandiflora Cagra.0751s0023 I 0.839
Carubv10008586m.g Capsella rubella Carubv10008586m.g I 0.839
Cagra.7865s0024 Capsella grandiflora Cagra.7865s0024 I 0.839
Gorai.003G182100 Gossypium raimondii Gorai.003G182100 I 0.839
Thhalv10007075m.g Eutrema salsugineum Thhalv10007075m.g I 0.839
Thhalv10000808m.g Eutrema salsugineum Thhalv10000808m.g I 0.839
Thhalv10024688m.g Eutrema salsugineum Thhalv10024688m.g I 0.839
PK18474.1 Cannabis sativa PK18474.1 D 0.839
chr2.CM0177.830.nc Lotus japonicus chr2.CM0177.830.nc I 0.839
SapurV1A.0151s0080 Salix purpurea SapurV1A.0151s0080 I 0.839
MDP0000136498 Malus domestica MDP0000136498 I 0.839
gene10501-v1.0-hybrid Fragaria vesca gene10501-v1.0-hybrid I 0.839
gene13705-v1.0-hybrid Fragaria vesca gene13705-v1.0-hybrid I 0.839
mgf002775m Mimulus guttatus mgf002775m I 0.839
MDP0000029168 Malus domestica MDP0000029168 I 0.839
Carubv10028441m.g Capsella rubella Carubv10028441m.g I 0.839
Ca_11514 Cicer arietinum Ca_11514 I 0.839
Bra017527 Brassica rapa Bra017527 I 0.839
Bra017523 Brassica rapa Bra017523 I 0.839
Bra017520 Brassica rapa Bra017520 I 0.839
Bra024998 Brassica rapa Bra024998 I 0.839
fgenesh2_kg.7__2520__AT4G17880.1 Arabidopsis lyrata fgenesh2_kg.7__2520__AT4G17880.1 I 0.839
GLYMA01G12740 Glycine max GLYMA01G12740 I 0.839
GLYMA01G02251 Glycine max GLYMA01G02251 I 0.839
Bra013263 Brassica rapa Bra013263 I 0.839
Bra010178 Brassica rapa Bra010178 I 0.839
Bo5g086990 Brassica oleracea Bo5g086990 I 0.839
Bo1g017990 Brassica oleracea Bo1g017990 I 0.839
Bo7g075710 Brassica oleracea Bo7g075710 I 0.839
Bo8g028850 Brassica oleracea Bo8g028850 I 0.839
Bo9g066680 Brassica oleracea Bo9g066680 I 0.839
Bo9g065530 Brassica oleracea Bo9g065530 I 0.839
GLYMA08G36720 Glycine max GLYMA08G36720 I 0.839
GLYMA09G33730 Glycine max GLYMA09G33730 I 0.839
scaffold_800152.1 Arabidopsis lyrata scaffold_800152.1 I 0.839
ATMYC2 Arabidopsis lyrata scaffold_103634.1 I 0.839
Solyc08g076930.1 Solanum lycopersicum Solyc08g076930.1 I 0.839
MYC2 Arabidopsis thaliana AT1G32640 D 0.839
Ca_12352 Cicer arietinum Ca_12352 I 0.839
Bo01130s010 Brassica oleracea Bo01130s010 I 0.839
PRUPE_ppa002404mg Prunus persica PRUPE_ppa002404mg I 0.839
POPTR_0003s09090 Populus trichocarpa POPTR_0003s09090 I 0.839
MTR_5g030430 Medicago truncatula MTR_5g030430 I 0.839
MYC3 Arabidopsis thaliana AT5G46760 D 0.839
MYC4 Arabidopsis thaliana AT4G17880 D 0.839
PGSC0003DMG400001161 Solanum tuberosum PGSC0003DMG400001161 I 0.839
Pm023237 Prunus mume Pm023237 I 0.839
PGSC0003DMG400017535 Solanum tuberosum PGSC0003DMG400017535 I 0.839
Eucgr.H02386 Eucalyptus grandis Eucgr.H02386 I 0.838