CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM5G879527
(
Zea mays
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GRMZM5G879527
T039986_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM5G879527_P01
bHLH
304
340
ATHPRSIAERVRRTKISERIRKLQELVPDMDKVTAPA
GRMZM5G879527_P02
bHLH
304
354
ATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQ
GRMZM5G879527_P03
bHLH
304
340
ATHPRSIAERVRRTKISERIRKLQELVPDMDKVTAPA
GRMZM5G879527_P04
bHLH
201
251
ATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQ
Links
Other
bHLH
family TFs
Other
Zea mays
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_5BL_4317E525B
Triticum aestivum
Traes_5BL_4317E525B
I
0.884
Si030166m.g
Setaria italica
Si030166m.g
I
0.884
Pavir.Ba00676
Panicum virgatum
Pavir.Ba00676
I
0.884
Pavir.Bb03157
Panicum virgatum
Pavir.Bb03157
I
0.884
Pavir.J25484
Panicum virgatum
Pavir.J25484
I
0.884
Pavir.Fa00493
Panicum virgatum
Pavir.Fa00493
I
0.884
Sb07g027810
Sorghum bicolor
Sb07g027810
I
0.884
Si013950m.g
Setaria italica
Si013950m.g
I
0.884
GRMZM2G153454
Zea mays
GRMZM2G153454
I
0.884
GRMZM2G142932
Zea mays
GRMZM2G142932
I
0.884
BRADI4G33670
Brachypodium distachyon
BRADI4G33670
I
0.884
MLOC_30102
Hordeum vulgare
MLOC_30102
I
0.884
mgf016092m
Mimulus guttatus
mgf016092m
I
0.872
Bra004678
Brassica rapa
Bra004678
I
0.872
Cucsa.143260
Cucumis sativus
Cucsa.143260
I
0.872
Cla006394
Citrullus lanatus
Cla006394
I
0.872
Bo4g015860
Brassica oleracea
Bo4g015860
I
0.872
MTR_4g065870
Medicago truncatula
MTR_4g065870
I
0.872
MTR_1g052470
Medicago truncatula
MTR_1g052470
I
0.872
Ca_18899
Cicer arietinum
Ca_18899
I
0.872
e_gw1.83.237.1
Physcomitrella patens
e_gw1.83.237.1
I
0.851
estExt_fgenesh1_pg.C_2130035
Physcomitrella patens
estExt_fgenesh1_pg.C_2130035
N
0.851
LPERR09G10800
Leersia perrieri
LPERR09G10800
I
0.849
LPERR08G16800
Leersia perrieri
LPERR08G16800
I
0.849