CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCAS_0A12210
(
Naumovozyma castellii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
NCAS_0A12210
T041776_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBF1
M00374_2.00
Saccharomyces cerevisiae
NCACGTGAY
RTCACGTGN
PBM
Berger et al.(2006)
Cbf1
0.839
0.755
CBF1
M01520_2.00
Saccharomyces cerevisiae
CACGTGAYH
DRTCACGTG
PBM
Zhu et al.(2009)
Cbf1
0.839
0.755
CBF1
M07440_2.00
Saccharomyces cerevisiae
TCACGTGH
DCACGTGA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0281.1
0.839
0.755
CBF1
M08485_2.00
Saccharomyces cerevisiae
NCAYRTGN
NCAYRTGN
Misc
DeBoer et al.(2011)
YJR060W_1347
0.839
0.755
CBF1
M09483_2.00
Saccharomyces cerevisiae
KCACGTGAYN
NRTCACGTGM
Misc
Heinz et al.(2010)
Yeast-Cbf1_GSE29506
0.839
0.755
CBF1
M09897_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_02
0.839
0.755
CBF1
M09898_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_03
0.839
0.755
CBF1
M09899_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_04
0.839
0.755
CBF1
M09900_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_B
0.839
0.755
CBF1
M09901_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$CBF1_Q6
0.839
0.755
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC67779
bHLH
196
244
RKESHKEVERRRRQNINTAIDTLAALLPMRESSKAAILMRSAEYIENLK
Links
Other
bHLH
family TFs
Other
Naumovozyma castellii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Scas_Contig673.33
Saccharomyces castellii
Scas_Contig673.33
I
0.914
KAFR_0D03630
Kazachstania africana
KAFR_0D03630
I
0.860
13072_YJR060W
Saccharomyces bayanus
13072_YJR060W
I
0.860
SKUD_191104
Saccharomyces kudriavzevii
SKUD_191104
I
0.860
SAKL0D12650g
Lachancea kluyveri
SAKL0D12650g
I
0.860
12538_YJR060W
Saccharomyces paradoxus
12538_YJR060W
I
0.860
12421_YJR060W
Saccharomyces mikatae
12421_YJR060W
I
0.860
TBLA_0D03730
Tetrapisispora blattae
TBLA_0D03730
I
0.840
Kpol_1054p48
Vanderwaltozyma polyspora
Kpol_1054p48
I
0.840
CBF1
Saccharomyces cerevisiae
YJR060W
D
0.839
KLLA0_B13761g
Kluyveromyces lactis
KLLA0_B13761g
N
0.839