POPTR_0014s10190 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0014s10190 T043896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0014s10190.1 bHLH 198 249
POPTR_0014s10190.2 bHLH 132 183
POPTR_0014s10190.3 bHLH 148 199
POPTR_0014s10190.4 bHLH 148 199

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0162s0340 Salix purpurea SapurV1A.0162s0340 N 0.914
SapurV1A.0003s0430 Salix purpurea SapurV1A.0003s0430 N 0.902
POPTR_0002s18100 Populus trichocarpa POPTR_0002s18100 N 0.902
GSMUA_Achr8G12330_001 Musa acuminata GSMUA_Achr8G12330_001 N 0.871
GSMUA_Achr11G02740_001 Musa acuminata GSMUA_Achr11G02740_001 N 0.871
cassava29786.valid.m1 Manihot esculenta cassava29786.valid.m1 N 0.866
Ca_22410 Cicer arietinum Ca_22410 N 0.866
30076.m004456 Ricinus communis 30076.m004456 N 0.866
GLYMA16G02020 Glycine max GLYMA16G02020 N 0.866
orange1.1g013752m.g Citrus sinensis orange1.1g013752m.g N 0.866
Ciclev10020360m.g Citrus clementina Ciclev10020360m.g N 0.866
gene18608-v1.0-hybrid Fragaria vesca gene18608-v1.0-hybrid N 0.866
chr3.CM0208.290.nc Lotus japonicus chr3.CM0208.290.nc N 0.866
GLYMA07G05500 Glycine max GLYMA07G05500 N 0.866
evm.TU.supercontig_57.85 Carica papaya evm.TU.supercontig_57.85 N 0.866
LPERR10G05620 Leersia perrieri LPERR10G05620 N 0.863
Gorai.007G113300 Gossypium raimondii Gorai.007G113300 N 0.863
LPERR02G27220 Leersia perrieri LPERR02G27220 N 0.863
TCM_005028 Theobroma cacao TCM_005028 N 0.863
BRADI1G71990 Brachypodium distachyon BRADI1G71990 N 0.863
PGSC0003DMG400016145 Solanum tuberosum PGSC0003DMG400016145 N 0.863
Solyc11g010340.1 Solanum lycopersicum Solyc11g010340.1 N 0.863
BRADI3G38510 Brachypodium distachyon BRADI3G38510 N 0.863
Gorai.007G113200 Gossypium raimondii Gorai.007G113200 N 0.863
BRADI3G58360 Brachypodium distachyon BRADI3G58360 N 0.863
GSMUA_Achr9G15000_001 Musa acuminata GSMUA_Achr9G15000_001 N 0.861
Lus10009475.g Linum usitatissimum Lus10009475.g N 0.857
Lus10001271.g Linum usitatissimum Lus10001271.g N 0.857
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.846
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.846
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.846
scaffold_403653.1 Arabidopsis lyrata scaffold_403653.1 N 0.844
Bostr.25993s0085 Boechera stricta Bostr.25993s0085 N 0.844
gene16221-v1.0-hybrid Fragaria vesca gene16221-v1.0-hybrid N 0.844
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.843
Sb01g049080 Sorghum bicolor Sb01g049080 N 0.843
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.843
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.843
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.843
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.843
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.843
Si040271m.g Setaria italica Si040271m.g N 0.843
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.843
OS10G0376900 Oryza sativa OS10G0376900 N 0.843
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.843
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.843
Si036568m.g Setaria italica Si036568m.g N 0.843
Si038653m.g Setaria italica Si038653m.g N 0.843
Si017701m.g Setaria italica Si017701m.g N 0.843
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.843
OBART02G33270 Oryza barthii OBART02G33270 N 0.843
OB10G16200 Oryza brachyantha OB10G16200 N 0.843
OB03G16590 Oryza brachyantha OB03G16590 N 0.843
OBART03G01740 Oryza barthii OBART03G01740 N 0.843
OBART10G08120 Oryza barthii OBART10G08120 N 0.843
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.843
OS03G0122100 Oryza sativa OS03G0122100 N 0.843
OB03G11710 Oryza brachyantha OB03G11710 N 0.843
OB02G40170 Oryza brachyantha OB02G40170 N 0.843
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.843
BRADI1G77070 Brachypodium distachyon BRADI1G77070 N 0.843
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.843
GRMZM2G475289 Zea mays GRMZM2G475289 N 0.843
LPERR03G01610 Leersia perrieri LPERR03G01610 N 0.843
MLOC_55870 Hordeum vulgare MLOC_55870 N 0.843
BGIOSGA011741 Oryza indica BGIOSGA011741 N 0.843
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.843
OGLUM03G01710 Oryza glumaepatula OGLUM03G01710 N 0.843
ORGLA03G0015000 Oryza glaberrima ORGLA03G0015000 N 0.843
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.843
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.843
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.843
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.843
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.843
ORUFI03G01470 Oryza rufipogon ORUFI03G01470 N 0.843
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.843
OPUNC03G01600 Oryza punctata OPUNC03G01600 N 0.843
OMERI03G01680 Oryza meridionalis OMERI03G01680 N 0.843
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.843
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.843
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.843
ONIVA02G30660 Oryza nivara ONIVA02G30660 N 0.843
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.843
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.843
gene18888-v1.0-hybrid Fragaria vesca gene18888-v1.0-hybrid N 0.842
Bo4g006950 Brassica oleracea Bo4g006950 N 0.841
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.841
Bo2g075510 Brassica oleracea Bo2g075510 N 0.839
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N 0.839
cassava34492.m1 Manihot esculenta cassava34492.m1 N 0.839
LPERR09G09700 Leersia perrieri LPERR09G09700 N 0.839
Bra008017 Brassica rapa Bra008017 N 0.839