CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_07s0205g00190
(
Vitis vinifera
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
VIT_07s0205g00190
T046187_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G22750
M06730_2.00
Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK
Dap-seq
OMalley et al.(2016)
bHLH18_col_a
0.867
0.700
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_07s0205g00190.t01
bHLH
160
209
QNQEHVIAERKRREKLNLQFIALSAIIPGLKKTDKASVLGDAVKYVKQLQ
Links
Other
bHLH
family TFs
Other
Vitis vinifera
TFs
198 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr8G05170_001
Musa acuminata
GSMUA_Achr8G05170_001
I
0.889
Ca_02263
Cicer arietinum
Ca_02263
I
0.881
gene07355-v1.0-hybrid
Fragaria vesca
gene07355-v1.0-hybrid
I
0.880
Gorai.008G087600
Gossypium raimondii
Gorai.008G087600
I
0.879
Lus10019247.g
Linum usitatissimum
Lus10019247.g
I
0.879
Gorai.003G034600
Gossypium raimondii
Gorai.003G034600
I
0.879
TCM_000894
Theobroma cacao
TCM_000894
I
0.879
GSMUA_Achr4G23070_001
Musa acuminata
GSMUA_Achr4G23070_001
I
0.878
orange1.1g026436m.g
Citrus sinensis
orange1.1g026436m.g
I
0.877
VIT_00s0824g00020
Vitis vinifera
VIT_00s0824g00020
I
0.877
VIT_00s0927g00010
Vitis vinifera
VIT_00s0927g00010
I
0.877
Lus10039640.g
Linum usitatissimum
Lus10039640.g
I
0.877
Lus10011578.g
Linum usitatissimum
Lus10011578.g
I
0.877
Ciclev10027504m.g
Citrus clementina
Ciclev10027504m.g
I
0.877
GLYMA07G30420
Glycine max
GLYMA07G30420
I
0.877
Bo3g088300
Brassica oleracea
Bo3g088300
I
0.876
PDK_20s1524891g001
Phoenix dactylifera
PDK_20s1524891g001
I
0.870
chr3.LjT47G05.50.nc
Lotus japonicus
chr3.LjT47G05.50.nc
I
0.869
chr2.CM0021.410.nc
Lotus japonicus
chr2.CM0021.410.nc
I
0.869
chr5.CM0158.350.nd
Lotus japonicus
chr5.CM0158.350.nd
I
0.869
evm.TU.supercontig_20.63
Carica papaya
evm.TU.supercontig_20.63
I
0.867
MDP0000159571
Malus domestica
MDP0000159571
I
0.867
MDP0000170202
Malus domestica
MDP0000170202
I
0.867
Bo4g150960
Brassica oleracea
Bo4g150960
I
0.867
Gorai.007G229000
Gossypium raimondii
Gorai.007G229000
I
0.867
PGSC0003DMG400005101
Solanum tuberosum
PGSC0003DMG400005101
I
0.867
AT2G22750
Arabidopsis thaliana
AT2G22750
D
0.867
PDK_20s1394471g002
Phoenix dactylifera
PDK_20s1394471g002
I
0.867
LjT17L12.80.nd
Lotus japonicus
LjT17L12.80.nd
I
0.867
Bra030210
Brassica rapa
Bra030210
I
0.867
Eucgr.H02389
Eucalyptus grandis
Eucgr.H02389
I
0.867
Thhalv10000426m.g
Eutrema salsugineum
Thhalv10000426m.g
I
0.867
Bra039924
Brassica rapa
Bra039924
I
0.867
Solyc01g106460.2
Solanum lycopersicum
Solyc01g106460.2
I
0.867
Eucgr.H02390
Eucalyptus grandis
Eucgr.H02390
I
0.867
SapurV1A.0821s0050
Salix purpurea
SapurV1A.0821s0050
I
0.867
Carubv10006834m.g
Capsella rubella
Carubv10006834m.g
I
0.864
cassava18197.valid.m1
Manihot esculenta
cassava18197.valid.m1
I
0.864
cassava16019.m1
Manihot esculenta
cassava16019.m1
I
0.864
Cagra.5392s0006
Capsella grandiflora
Cagra.5392s0006
I
0.864
Aquca_010_00012
Aquilegia coerulea
Aquca_010_00012
I
0.864
Cucsa.218800
Cucumis sativus
Cucsa.218800
I
0.864
29804.m001498
Ricinus communis
29804.m001498
I
0.864
cassava35671.valid.m1
Manihot esculenta
cassava35671.valid.m1
I
0.864
cassava20178.m1
Manihot esculenta
cassava20178.m1
I
0.864
Cagra.6066s0006
Capsella grandiflora
Cagra.6066s0006
I
0.864
cassava37087.valid.m1
Manihot esculenta
cassava37087.valid.m1
I
0.864
Pm002304
Prunus mume
Pm002304
I
0.864
Traes_4DS_7F3D9E4D9
Triticum aestivum
Traes_4DS_7F3D9E4D9
I
0.864
TRIUR3_26880
Triticum urartu
TRIUR3_26880
I
0.864
Traes_4AL_F3571097B
Triticum aestivum
Traes_4AL_F3571097B
I
0.864
TCM_006357
Theobroma cacao
TCM_006357
I
0.864
AMTR_s00033p00078670
Amborella trichopoda
AMTR_s00033p00078670
I
0.864
TCM_000895
Theobroma cacao
TCM_000895
I
0.864
VIT_03s0088g01240
Vitis vinifera
VIT_03s0088g01240
I
0.864
VIT_07s0205g00160
Vitis vinifera
VIT_07s0205g00160
I
0.864
Pm021008
Prunus mume
Pm021008
I
0.864
28179.m000478
Ricinus communis
28179.m000478
I
0.864
Pm002305
Prunus mume
Pm002305
I
0.864
Carubv10025041m.g
Capsella rubella
Carubv10025041m.g
I
0.864
Cla000123
Citrullus lanatus
Cla000123
I
0.864
28179.m000479
Ricinus communis
28179.m000479
I
0.864
Gorai.002G211500
Gossypium raimondii
Gorai.002G211500
I
0.864
orange1.1g021208m.g
Citrus sinensis
orange1.1g021208m.g
I
0.864
orange1.1g037441m.g
Citrus sinensis
orange1.1g037441m.g
I
0.864
MDP0000502440
Malus domestica
MDP0000502440
I
0.864
MDP0000318216
Malus domestica
MDP0000318216
I
0.864
MDP0000174149
Malus domestica
MDP0000174149
I
0.864
MDP0000291132
Malus domestica
MDP0000291132
I
0.864
Pavir.J01849
Panicum virgatum
Pavir.J01849
I
0.864
Pavir.J35103
Panicum virgatum
Pavir.J35103
I
0.864
PK09122.1
Cannabis sativa
PK09122.1
I
0.864
PK11573.1
Cannabis sativa
PK11573.1
I
0.864
Thhalv10025715m.g
Eutrema salsugineum
Thhalv10025715m.g
I
0.864
SapurV1A.3034s0010
Salix purpurea
SapurV1A.3034s0010
I
0.864
SapurV1A.0019s0910
Salix purpurea
SapurV1A.0019s0910
I
0.864
SapurV1A.0279s0180
Salix purpurea
SapurV1A.0279s0180
I
0.864
Lus10039639.g
Linum usitatissimum
Lus10039639.g
I
0.864
Lus10020503.g
Linum usitatissimum
Lus10020503.g
I
0.864
gene05610-v1.0-hybrid
Fragaria vesca
gene05610-v1.0-hybrid
I
0.864
gene05612-v1.0-hybrid
Fragaria vesca
gene05612-v1.0-hybrid
I
0.864
evm.TU.supercontig_129.37
Carica papaya
evm.TU.supercontig_129.37
I
0.864
Eucgr.I02518
Eucalyptus grandis
Eucgr.I02518
I
0.864
Ciclev10028925m.g
Citrus clementina
Ciclev10028925m.g
I
0.864
Eucgr.I00634
Eucalyptus grandis
Eucgr.I00634
I
0.864
BGIOSGA013493
Oryza indica
BGIOSGA013493
I
0.864
Si036393m.g
Setaria italica
Si036393m.g
I
0.864
Lus10003488.g
Linum usitatissimum
Lus10003488.g
I
0.864
Lus10012457.g
Linum usitatissimum
Lus10012457.g
I
0.864
BHLH25
Arabidopsis thaliana
AT4G37850
I
0.864
Gorai.007G228900
Gossypium raimondii
Gorai.007G228900
I
0.864
Gorai.003G034700
Gossypium raimondii
Gorai.003G034700
I
0.864
Ciclev10027158m.g
Citrus clementina
Ciclev10027158m.g
I
0.864
Traes_4BS_34AF89ACE
Triticum aestivum
Traes_4BS_34AF89ACE
I
0.864
OGLUM03G32210
Oryza glumaepatula
OGLUM03G32210
I
0.864
MTR_5g014640
Medicago truncatula
MTR_5g014640
I
0.864
MLOC_64735
Hordeum vulgare
MLOC_64735
I
0.864
LPERR03G27220
Leersia perrieri
LPERR03G27220
I
0.864
OMERI03G29350
Oryza meridionalis
OMERI03G29350
I
0.864
ONIVA03G34090
Oryza nivara
ONIVA03G34090
I
0.864
OS03G0725800
Oryza sativa
OS03G0725800
I
0.864
ORUFI03G33950
Oryza rufipogon
ORUFI03G33950
I
0.864
ORGLA03G0295100
Oryza glaberrima
ORGLA03G0295100
I
0.864
OPUNC03G29750
Oryza punctata
OPUNC03G29750
I
0.864
GSMUA_AchrUn_randomG15440_001
Musa acuminata
GSMUA_AchrUn_randomG15440_001
I
0.864
Bo1g003350
Brassica oleracea
Bo1g003350
I
0.864
BRADI1G10170
Brachypodium distachyon
BRADI1G10170
I
0.864
Bra011790
Brassica rapa
Bra011790
I
0.864
Bra010617
Brassica rapa
Bra010617
I
0.864
Bo3g153150
Brassica oleracea
Bo3g153150
I
0.864
F775_11371
Aegilops tauschii
F775_11371
I
0.864
fgenesh2_kg.4__196__AT2G22750.1
Arabidopsis lyrata
fgenesh2_kg.4__196__AT2G22750.1
I
0.864
GSMUA_Achr2G08590_001
Musa acuminata
GSMUA_Achr2G08590_001
I
0.864
GRMZM2G082343
Zea mays
GRMZM2G082343
I
0.864
GRMZM2G019806
Zea mays
GRMZM2G019806
I
0.864
GLYMA11G04690
Glycine max
GLYMA11G04690
I
0.864
POPTR_0001s29400
Populus trichocarpa
POPTR_0001s29400
I
0.864
OBART03G32580
Oryza barthii
OBART03G32580
I
0.864
Sb01g009590
Sorghum bicolor
Sb01g009590
I
0.864
SELMODRAFT_48361
Selaginella moellendorffii
SELMODRAFT_48361
I
0.864
PRUPE_ppa017640mg
Prunus persica
PRUPE_ppa017640mg
I
0.864
PRUPE_ppa007561mg
Prunus persica
PRUPE_ppa007561mg
I
0.864
PRUPE_ppa008130mg
Prunus persica
PRUPE_ppa008130mg
I
0.864
POPTR_0009s08500
Populus trichocarpa
POPTR_0009s08500
I
0.864
SELMODRAFT_34848
Selaginella moellendorffii
SELMODRAFT_34848
I
0.864
POPTR_0005s09810
Populus trichocarpa
POPTR_0005s09810
I
0.864
PDK_20s1524891g002
Phoenix dactylifera
PDK_20s1524891g002
I
0.863
Bra013128
Brassica rapa
Bra013128
I
0.856
Ca_02264
Cicer arietinum
Ca_02264
I
0.855
GLYMA01G40620
Glycine max
GLYMA01G40620
I
0.855
MTR_5g014520
Medicago truncatula
MTR_5g014520
I
0.855
GSMUA_Achr7G00800_001
Musa acuminata
GSMUA_Achr7G00800_001
I
0.854
GSMUA_Achr3G30620_001
Musa acuminata
GSMUA_Achr3G30620_001
I
0.853
GLYMA08G06831
Glycine max
GLYMA08G06831
I
0.853
Si011709m.g
Setaria italica
Si011709m.g
I
0.851
GRMZM2G068604
Zea mays
GRMZM2G068604
I
0.850
OB03G36530
Oryza brachyantha
OB03G36530
I
0.850
Sb08g022760
Sorghum bicolor
Sb08g022760
I
0.850
LPERR03G24050
Leersia perrieri
LPERR03G24050
I
0.850
OS12G0632600
Oryza sativa
OS12G0632600
I
0.850
OBART12G19700
Oryza barthii
OBART12G19700
I
0.850
LPERR12G16560
Leersia perrieri
LPERR12G16560
I
0.850
BGIOSGA010080
Oryza indica
BGIOSGA010080
I
0.850
BRADI4G00920
Brachypodium distachyon
BRADI4G00920
I
0.850
OGLUM03G29270
Oryza glumaepatula
OGLUM03G29270
I
0.850
ONIVA03G07570
Oryza nivara
ONIVA03G07570
I
0.850
OMERI12G15000
Oryza meridionalis
OMERI12G15000
I
0.850
OPUNC12G17950
Oryza punctata
OPUNC12G17950
I
0.850
ORGLA03G0269200
Oryza glaberrima
ORGLA03G0269200
I
0.850
ORUFI12G22050
Oryza rufipogon
ORUFI12G22050
I
0.850
ORGLA12G0170500
Oryza glaberrima
ORGLA12G0170500
I
0.850
BGIOSGA037855
Oryza indica
BGIOSGA037855
I
0.850
OPUNC03G26600
Oryza punctata
OPUNC03G26600
I
0.850
GRMZM2G049686
Zea mays
GRMZM2G049686
I
0.850
OMERI03G25360
Oryza meridionalis
OMERI03G25360
I
0.850
OGLUM12G21470
Oryza glumaepatula
OGLUM12G21470
I
0.850
OLONG_017178
Oryza longistaminata
OLONG_017178
I
0.850
OLONG_002504
Oryza longistaminata
OLONG_002504
I
0.850
GSMUA_Achr6G35730_001
Musa acuminata
GSMUA_Achr6G35730_001
I
0.847
POPTR_0007s14480
Populus trichocarpa
POPTR_0007s14480
I
0.846
Cla014288
Citrullus lanatus
Cla014288
I
0.845
Cucsa.103630
Cucumis sativus
Cucsa.103630
I
0.844
Eucgr.H02398
Eucalyptus grandis
Eucgr.H02398
I
0.843
chr2.CM0021.380.nc
Lotus japonicus
chr2.CM0021.380.nc
I
0.843
Eucgr.H02391
Eucalyptus grandis
Eucgr.H02391
I
0.842
MDP0000124672
Malus domestica
MDP0000124672
I
0.842
GLYMA05G23291
Glycine max
GLYMA05G23291
I
0.840
GLYMA17G16720
Glycine max
GLYMA17G16720
I
0.840
GLYMA05G23530
Glycine max
GLYMA05G23530
I
0.840
GSMUA_Achr7G27600_001
Musa acuminata
GSMUA_Achr7G27600_001
I
0.840
Bostr.25542s0234
Boechera stricta
Bostr.25542s0234
I
0.840
estExt_fgenesh1_pg.C_420092
Physcomitrella patens
estExt_fgenesh1_pg.C_420092
I
0.840
estExt_fgenesh1_pg.C_310143
Physcomitrella patens
estExt_fgenesh1_pg.C_310143
I
0.840
GSMUA_Achr3G26180_001
Musa acuminata
GSMUA_Achr3G26180_001
I
0.840
GSMUA_Achr4G03160_001
Musa acuminata
GSMUA_Achr4G03160_001
I
0.840
BRADI1G12770
Brachypodium distachyon
BRADI1G12770
I
0.839
Si036185m.g
Setaria italica
Si036185m.g
I
0.839
MLOC_42946
Hordeum vulgare
MLOC_42946
I
0.839
Sb01g012260
Sorghum bicolor
Sb01g012260
I
0.839
Pavir.Ia01004
Panicum virgatum
Pavir.Ia01004
I
0.839
GRMZM2G155043
Zea mays
GRMZM2G155043
I
0.839
Traes_4DS_6A9EB40A4
Triticum aestivum
Traes_4DS_6A9EB40A4
I
0.839
Si038721m.g
Setaria italica
Si038721m.g
I
0.839
Si039325m.g
Setaria italica
Si039325m.g
I
0.839
Si011972m.g
Setaria italica
Si011972m.g
I
0.839
F775_11635
Aegilops tauschii
F775_11635
I
0.839
TRIUR3_05977
Triticum urartu
TRIUR3_05977
I
0.839
GRMZM2G355469
Zea mays
GRMZM2G355469
I
0.839
Pavir.Ib04190
Panicum virgatum
Pavir.Ib04190
I
0.839
Pavir.Ib04188
Panicum virgatum
Pavir.Ib04188
I
0.839
Pavir.Ib04096
Panicum virgatum
Pavir.Ib04096
I
0.839
Pavir.J30022
Panicum virgatum
Pavir.J30022
I
0.839
Sb01g012280
Sorghum bicolor
Sb01g012280
I
0.839
GLYMA01G40600
Glycine max
GLYMA01G40600
I
0.839
GLYMA01G40611
Glycine max
GLYMA01G40611
I
0.839
Sb06g017460
Sorghum bicolor
Sb06g017460
I
0.839
Pavir.Ia01038
Panicum virgatum
Pavir.Ia01038
I
0.839
Pavir.Ia01059
Panicum virgatum
Pavir.Ia01059
I
0.839