Si011709m.g (Setaria italica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Si011709m.g T044713_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.851 0.551
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si011709m bHLH 162 210

Links

Other bHLH family TFs
Other Setaria italica TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G00920 Brachypodium distachyon BRADI4G00920 I 0.890
ONIVA03G07570 Oryza nivara ONIVA03G07570 I 0.890
Sb08g022760 Sorghum bicolor Sb08g022760 I 0.890
OMERI12G15000 Oryza meridionalis OMERI12G15000 I 0.890
OMERI03G25360 Oryza meridionalis OMERI03G25360 I 0.890
LPERR03G24050 Leersia perrieri LPERR03G24050 I 0.890
OPUNC03G26600 Oryza punctata OPUNC03G26600 I 0.890
ORGLA03G0269200 Oryza glaberrima ORGLA03G0269200 I 0.890
ORGLA12G0170500 Oryza glaberrima ORGLA12G0170500 I 0.890
ORUFI12G22050 Oryza rufipogon ORUFI12G22050 I 0.890
OS12G0632600 Oryza sativa OS12G0632600 I 0.890
OLONG_017178 Oryza longistaminata OLONG_017178 I 0.890
OLONG_002504 Oryza longistaminata OLONG_002504 I 0.890
OBART12G19700 Oryza barthii OBART12G19700 I 0.890
BGIOSGA010080 Oryza indica BGIOSGA010080 I 0.890
OB03G36530 Oryza brachyantha OB03G36530 I 0.890
LPERR12G16560 Leersia perrieri LPERR12G16560 I 0.890
OGLUM03G29270 Oryza glumaepatula OGLUM03G29270 I 0.890
BGIOSGA037855 Oryza indica BGIOSGA037855 I 0.890
GRMZM2G049686 Zea mays GRMZM2G049686 I 0.890
OPUNC12G17950 Oryza punctata OPUNC12G17950 I 0.890
GRMZM2G068604 Zea mays GRMZM2G068604 I 0.890
OGLUM12G21470 Oryza glumaepatula OGLUM12G21470 I 0.890
TRIUR3_13152 Triticum urartu TRIUR3_13152 I 0.889
MLOC_42946 Hordeum vulgare MLOC_42946 I 0.878
Sb01g012280 Sorghum bicolor Sb01g012280 I 0.878
Pavir.Ia01059 Panicum virgatum Pavir.Ia01059 I 0.878
Pavir.Ia01038 Panicum virgatum Pavir.Ia01038 I 0.878
Pavir.Ib04096 Panicum virgatum Pavir.Ib04096 I 0.878
Pavir.Ib04188 Panicum virgatum Pavir.Ib04188 I 0.878
Pavir.J30022 Panicum virgatum Pavir.J30022 I 0.878
Pavir.Ib04190 Panicum virgatum Pavir.Ib04190 I 0.878
Pavir.Ia01004 Panicum virgatum Pavir.Ia01004 I 0.878
TRIUR3_05977 Triticum urartu TRIUR3_05977 I 0.878
Si011972m.g Setaria italica Si011972m.g I 0.878
Sb06g017460 Sorghum bicolor Sb06g017460 I 0.878
Si036185m.g Setaria italica Si036185m.g I 0.878
Si038721m.g Setaria italica Si038721m.g I 0.878
Traes_4DS_6A9EB40A4 Triticum aestivum Traes_4DS_6A9EB40A4 I 0.878
Sb01g012260 Sorghum bicolor Sb01g012260 I 0.878
Si039325m.g Setaria italica Si039325m.g I 0.878
GRMZM2G155043 Zea mays GRMZM2G155043 I 0.878
F775_11635 Aegilops tauschii F775_11635 I 0.878
BRADI1G12770 Brachypodium distachyon BRADI1G12770 I 0.878
GRMZM2G355469 Zea mays GRMZM2G355469 I 0.878
F775_12608 Aegilops tauschii F775_12608 I 0.878
GLYMA05G23291 Glycine max GLYMA05G23291 I 0.877
MTR_4g097940 Medicago truncatula MTR_4g097940 I 0.875
GLYMA17G16741 Glycine max GLYMA17G16741 I 0.875
GSMUA_Achr8G05170_001 Musa acuminata GSMUA_Achr8G05170_001 I 0.873
GRMZM2G036554 Zea mays GRMZM2G036554 I 0.870
Si024086m.g Setaria italica Si024086m.g I 0.870
Pavir.J26871 Panicum virgatum Pavir.J26871 I 0.870
TCM_000894 Theobroma cacao TCM_000894 I 0.864
Gorai.003G034600 Gossypium raimondii Gorai.003G034600 I 0.864
VIT_00s0927g00010 Vitis vinifera VIT_00s0927g00010 I 0.861
Ciclev10027504m.g Citrus clementina Ciclev10027504m.g I 0.861
VIT_00s0824g00020 Vitis vinifera VIT_00s0824g00020 I 0.861
GLYMA07G30420 Glycine max GLYMA07G30420 I 0.861
orange1.1g026436m.g Citrus sinensis orange1.1g026436m.g I 0.861
Gorai.008G087600 Gossypium raimondii Gorai.008G087600 I 0.860
GLYMA01G40620 Glycine max GLYMA01G40620 I 0.859
ORGLA03G0268800 Oryza glaberrima ORGLA03G0268800 I 0.859
TRIUR3_29908 Triticum urartu TRIUR3_29908 I 0.859
Ca_02264 Cicer arietinum Ca_02264 I 0.859
Ca_02263 Cicer arietinum Ca_02263 I 0.859
Si022171m.g Setaria italica Si022171m.g I 0.859
GSMUA_Achr4G23070_001 Musa acuminata GSMUA_Achr4G23070_001 I 0.859
F775_11133 Aegilops tauschii F775_11133 I 0.859
MTR_5g014520 Medicago truncatula MTR_5g014520 I 0.859
OBART03G29020 Oryza barthii OBART03G29020 I 0.859
gene07355-v1.0-hybrid Fragaria vesca gene07355-v1.0-hybrid I 0.858
Lus10039640.g Linum usitatissimum Lus10039640.g I 0.858
OS03G0671800 Oryza sativa OS03G0671800 I 0.858
Cagra.0882s0006 Capsella grandiflora Cagra.0882s0006 N 0.855
Ca_05320 Cicer arietinum Ca_05320 I 0.855
Carubv10023610m.g Capsella rubella Carubv10023610m.g N 0.855
NAI1 Arabidopsis thaliana AT2G22770 N 0.855
NAI1 Arabidopsis lyrata fgenesh2_kg.4__198__AT2G22770.1 N 0.855
Bostr.19427s0044 Boechera stricta Bostr.19427s0044 N 0.855
Pavir.Ia03339 Panicum virgatum Pavir.Ia03339 I 0.854
GRMZM2G120021 Zea mays GRMZM2G120021 I 0.854
F775_16881 Aegilops tauschii F775_16881 N 0.852
MDP0000170202 Malus domestica MDP0000170202 I 0.851
MDP0000159571 Malus domestica MDP0000159571 I 0.851
Bra030210 Brassica rapa Bra030210 I 0.851
Thhalv10000426m.g Eutrema salsugineum Thhalv10000426m.g I 0.851
Bo4g150960 Brassica oleracea Bo4g150960 I 0.851
Gorai.007G229000 Gossypium raimondii Gorai.007G229000 I 0.851
Bra039924 Brassica rapa Bra039924 I 0.851
Gorai.012G161900 Gossypium raimondii Gorai.012G161900 I 0.851
AT2G22750 Arabidopsis thaliana AT2G22750 D 0.851
Solyc01g106460.2 Solanum lycopersicum Solyc01g106460.2 I 0.851
PDK_20s1394471g002 Phoenix dactylifera PDK_20s1394471g002 I 0.851
evm.TU.supercontig_20.63 Carica papaya evm.TU.supercontig_20.63 I 0.851
VIT_07s0205g00190 Vitis vinifera VIT_07s0205g00190 I 0.851
PGSC0003DMG400005101 Solanum tuberosum PGSC0003DMG400005101 I 0.851
MTR_4g097920 Medicago truncatula MTR_4g097920 I 0.851
chr5.CM0158.350.nd Lotus japonicus chr5.CM0158.350.nd I 0.849
chr3.LjT47G05.50.nc Lotus japonicus chr3.LjT47G05.50.nc I 0.849
chr2.CM0021.410.nc Lotus japonicus chr2.CM0021.410.nc I 0.849
Carubv10025041m.g Capsella rubella Carubv10025041m.g I 0.848
Ciclev10028925m.g Citrus clementina Ciclev10028925m.g I 0.848
Ciclev10027158m.g Citrus clementina Ciclev10027158m.g I 0.848
Eucgr.I02518 Eucalyptus grandis Eucgr.I02518 I 0.848
Gorai.007G228900 Gossypium raimondii Gorai.007G228900 I 0.848
Gorai.003G034700 Gossypium raimondii Gorai.003G034700 I 0.848
Gorai.002G211500 Gossypium raimondii Gorai.002G211500 I 0.848
gene05612-v1.0-hybrid Fragaria vesca gene05612-v1.0-hybrid I 0.848
gene05610-v1.0-hybrid Fragaria vesca gene05610-v1.0-hybrid I 0.848
PDK_20s1524891g001 Phoenix dactylifera PDK_20s1524891g001 I 0.848
evm.TU.supercontig_129.37 Carica papaya evm.TU.supercontig_129.37 I 0.848
Eucgr.I00634 Eucalyptus grandis Eucgr.I00634 I 0.848
PK09122.1 Cannabis sativa PK09122.1 I 0.848
Bo1g003350 Brassica oleracea Bo1g003350 I 0.848
Bo3g153150 Brassica oleracea Bo3g153150 I 0.848
orange1.1g037441m.g Citrus sinensis orange1.1g037441m.g I 0.848
SapurV1A.0279s0180 Salix purpurea SapurV1A.0279s0180 I 0.848
BGIOSGA013493 Oryza indica BGIOSGA013493 I 0.848
BGIOSGA013293 Oryza indica BGIOSGA013293 I 0.848
Pavir.J35103 Panicum virgatum Pavir.J35103 I 0.848
SapurV1A.0019s0910 Salix purpurea SapurV1A.0019s0910 I 0.848
Pavir.J01849 Panicum virgatum Pavir.J01849 I 0.848
BHLH25 Arabidopsis thaliana AT4G37850 I 0.848
orange1.1g021208m.g Citrus sinensis orange1.1g021208m.g I 0.848
MDP0000502440 Malus domestica MDP0000502440 I 0.848
Thhalv10025715m.g Eutrema salsugineum Thhalv10025715m.g I 0.848
MDP0000174149 Malus domestica MDP0000174149 I 0.848
Lus10039639.g Linum usitatissimum Lus10039639.g I 0.848
Lus10003488.g Linum usitatissimum Lus10003488.g I 0.848
MDP0000291132 Malus domestica MDP0000291132 I 0.848
MDP0000318216 Malus domestica MDP0000318216 I 0.848
Carubv10006834m.g Capsella rubella Carubv10006834m.g I 0.848
SapurV1A.3034s0010 Salix purpurea SapurV1A.3034s0010 I 0.848
PDK_20s1524891g002 Phoenix dactylifera PDK_20s1524891g002 I 0.848
PK11573.1 Cannabis sativa PK11573.1 I 0.848
28179.m000479 Ricinus communis 28179.m000479 I 0.848
OS03G0725800 Oryza sativa OS03G0725800 I 0.848
POPTR_0001s29400 Populus trichocarpa POPTR_0001s29400 I 0.848
fgenesh2_kg.4__196__AT2G22750.1 Arabidopsis lyrata fgenesh2_kg.4__196__AT2G22750.1 I 0.848
ORUFI03G33950 Oryza rufipogon ORUFI03G33950 I 0.848
ORGLA03G0295100 Oryza glaberrima ORGLA03G0295100 I 0.848
ORUFI03G30180 Oryza rufipogon ORUFI03G30180 I 0.848
POPTR_0005s09810 Populus trichocarpa POPTR_0005s09810 I 0.848
POPTR_0009s08500 Populus trichocarpa POPTR_0009s08500 I 0.848
Cagra.6066s0006 Capsella grandiflora Cagra.6066s0006 I 0.848
SELMODRAFT_48361 Selaginella moellendorffii SELMODRAFT_48361 I 0.848
Sb01g012250 Sorghum bicolor Sb01g012250 I 0.848
Sb01g009590 Sorghum bicolor Sb01g009590 I 0.848
PRUPE_ppa008130mg Prunus persica PRUPE_ppa008130mg I 0.848
PRUPE_ppa017640mg Prunus persica PRUPE_ppa017640mg I 0.848
OPUNC03G29750 Oryza punctata OPUNC03G29750 I 0.848
OPUNC03G26580 Oryza punctata OPUNC03G26580 I 0.848
OGLUM03G29200 Oryza glumaepatula OGLUM03G29200 I 0.848
GRMZM2G095899 Zea mays GRMZM2G095899 I 0.848
OBART03G32580 Oryza barthii OBART03G32580 I 0.848
GSMUA_Achr2G08590_001 Musa acuminata GSMUA_Achr2G08590_001 I 0.848
GSMUA_AchrUn_randomG15440_001 Musa acuminata GSMUA_AchrUn_randomG15440_001 I 0.848
LPERR03G27220 Leersia perrieri LPERR03G27220 I 0.848
OGLUM03G32210 Oryza glumaepatula OGLUM03G32210 I 0.848
GRMZM2G082343 Zea mays GRMZM2G082343 I 0.848
ONIVA03G30250 Oryza nivara ONIVA03G30250 I 0.848
ONIVA03G34090 Oryza nivara ONIVA03G34090 I 0.848
GLYMA11G04690 Glycine max GLYMA11G04690 I 0.848
OMERI03G29350 Oryza meridionalis OMERI03G29350 I 0.848
GRMZM2G019806 Zea mays GRMZM2G019806 I 0.848
Si036393m.g Setaria italica Si036393m.g I 0.848
SELMODRAFT_34848 Selaginella moellendorffii SELMODRAFT_34848 I 0.848
cassava16019.m1 Manihot esculenta cassava16019.m1 I 0.848
cassava18197.valid.m1 Manihot esculenta cassava18197.valid.m1 I 0.848
29804.m001498 Ricinus communis 29804.m001498 I 0.848
Pm021008 Prunus mume Pm021008 I 0.848
Pm002305 Prunus mume Pm002305 I 0.848
cassava20178.m1 Manihot esculenta cassava20178.m1 I 0.848
cassava35671.valid.m1 Manihot esculenta cassava35671.valid.m1 I 0.848
Cagra.5392s0006 Capsella grandiflora Cagra.5392s0006 I 0.848
Aquca_010_00012 Aquilegia coerulea Aquca_010_00012 I 0.848
Cucsa.218800 Cucumis sativus Cucsa.218800 I 0.848
cassava37087.valid.m1 Manihot esculenta cassava37087.valid.m1 I 0.848
Cla000123 Citrullus lanatus Cla000123 I 0.848
28179.m000478 Ricinus communis 28179.m000478 I 0.848
TCM_000895 Theobroma cacao TCM_000895 I 0.848
VIT_07s0205g00160 Vitis vinifera VIT_07s0205g00160 I 0.848
AMTR_s00033p00078670 Amborella trichopoda AMTR_s00033p00078670 I 0.848
Bra011790 Brassica rapa Bra011790 I 0.848
VIT_03s0088g01240 Vitis vinifera VIT_03s0088g01240 I 0.848
Bra010617 Brassica rapa Bra010617 I 0.848
Eucgr.H02390 Eucalyptus grandis Eucgr.H02390 I 0.847
Eucgr.H02389 Eucalyptus grandis Eucgr.H02389 I 0.847
TCM_006357 Theobroma cacao TCM_006357 I 0.845
LjT17L12.80.nd Lotus japonicus LjT17L12.80.nd I 0.845
Lus10020503.g Linum usitatissimum Lus10020503.g I 0.845
mg004185m Mimulus guttatus mg004185m I 0.845
Lus10012457.g Linum usitatissimum Lus10012457.g I 0.845
SapurV1A.0821s0050 Salix purpurea SapurV1A.0821s0050 I 0.845
mg008709m Mimulus guttatus mg008709m I 0.845
Lus10019247.g Linum usitatissimum Lus10019247.g I 0.843
Thhalv10000251m.g Eutrema salsugineum Thhalv10000251m.g N 0.842
Lus10011578.g Linum usitatissimum Lus10011578.g I 0.841
Pavir.Ca01239 Panicum virgatum Pavir.Ca01239 N 0.840
Bra013128 Brassica rapa Bra013128 I 0.840
GLYMA11G04681 Glycine max GLYMA11G04681 I 0.838