GRMZM2G120021 (Zea mays)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 GRMZM2G120021 T039889_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.851 0.694
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.843 0.571
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G120021_P01 bHLH 176 224

Links

Other bHLH family TFs
Other Zea mays TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G355469 Zea mays GRMZM2G355469 I 0.890
Si039325m.g Setaria italica Si039325m.g I 0.890
Pavir.Ib04188 Panicum virgatum Pavir.Ib04188 I 0.890
GRMZM2G155043 Zea mays GRMZM2G155043 I 0.890
Pavir.Ib04096 Panicum virgatum Pavir.Ib04096 I 0.890
F775_11635 Aegilops tauschii F775_11635 I 0.890
Pavir.Ia01059 Panicum virgatum Pavir.Ia01059 I 0.890
Si038721m.g Setaria italica Si038721m.g I 0.890
MLOC_42946 Hordeum vulgare MLOC_42946 I 0.890
Sb01g012260 Sorghum bicolor Sb01g012260 I 0.890
Pavir.Ia01004 Panicum virgatum Pavir.Ia01004 I 0.890
Sb01g012280 Sorghum bicolor Sb01g012280 I 0.890
Sb06g017460 Sorghum bicolor Sb06g017460 I 0.890
Si011972m.g Setaria italica Si011972m.g I 0.890
Pavir.Ib04190 Panicum virgatum Pavir.Ib04190 I 0.890
Pavir.Ia01038 Panicum virgatum Pavir.Ia01038 I 0.890
Si036185m.g Setaria italica Si036185m.g I 0.890
Traes_4DS_6A9EB40A4 Triticum aestivum Traes_4DS_6A9EB40A4 I 0.890
BRADI1G12770 Brachypodium distachyon BRADI1G12770 I 0.890
TRIUR3_05977 Triticum urartu TRIUR3_05977 I 0.890
OBART12G19700 Oryza barthii OBART12G19700 I 0.879
OGLUM03G29270 Oryza glumaepatula OGLUM03G29270 I 0.879
OGLUM12G21470 Oryza glumaepatula OGLUM12G21470 I 0.879
OLONG_002504 Oryza longistaminata OLONG_002504 I 0.879
OB03G36530 Oryza brachyantha OB03G36530 I 0.879
ORGLA12G0170500 Oryza glaberrima ORGLA12G0170500 I 0.879
BGIOSGA037855 Oryza indica BGIOSGA037855 I 0.879
OLONG_017178 Oryza longistaminata OLONG_017178 I 0.879
BRADI4G00920 Brachypodium distachyon BRADI4G00920 I 0.879
OMERI03G25360 Oryza meridionalis OMERI03G25360 I 0.879
BGIOSGA010080 Oryza indica BGIOSGA010080 I 0.879
OPUNC12G17950 Oryza punctata OPUNC12G17950 I 0.879
ORGLA03G0269200 Oryza glaberrima ORGLA03G0269200 I 0.879
Pavir.J30022 Panicum virgatum Pavir.J30022 I 0.879
OPUNC03G26600 Oryza punctata OPUNC03G26600 I 0.879
Sb08g022760 Sorghum bicolor Sb08g022760 I 0.879
OMERI12G15000 Oryza meridionalis OMERI12G15000 I 0.879
ONIVA03G07570 Oryza nivara ONIVA03G07570 I 0.879
ORUFI12G22050 Oryza rufipogon ORUFI12G22050 I 0.879
LPERR03G24050 Leersia perrieri LPERR03G24050 I 0.879
LPERR12G16560 Leersia perrieri LPERR12G16560 I 0.879
GRMZM2G049686 Zea mays GRMZM2G049686 I 0.879
OS12G0632600 Oryza sativa OS12G0632600 I 0.879
GRMZM2G068604 Zea mays GRMZM2G068604 I 0.879
GLYMA05G23291 Glycine max GLYMA05G23291 I 0.878
GLYMA17G16741 Glycine max GLYMA17G16741 I 0.876
MTR_4g097940 Medicago truncatula MTR_4g097940 I 0.876
MTR_4g097920 Medicago truncatula MTR_4g097920 I 0.876
GRMZM2G095899 Zea mays GRMZM2G095899 I 0.860
Sb01g012250 Sorghum bicolor Sb01g012250 I 0.860
Ca_05320 Cicer arietinum Ca_05320 I 0.855
TRIUR3_13152 Triticum urartu TRIUR3_13152 I 0.855
F775_12608 Aegilops tauschii F775_12608 I 0.855
Ca_09379 Cicer arietinum Ca_09379 I 0.854
Si011709m.g Setaria italica Si011709m.g I 0.854
Pavir.Ia03339 Panicum virgatum Pavir.Ia03339 I 0.854
Gorai.012G161900 Gossypium raimondii Gorai.012G161900 I 0.852
PDK_20s1394471g002 Phoenix dactylifera PDK_20s1394471g002 I 0.851
Bra039924 Brassica rapa Bra039924 I 0.851
AT2G22750 Arabidopsis thaliana AT2G22750 D 0.851
Thhalv10000426m.g Eutrema salsugineum Thhalv10000426m.g I 0.851
MDP0000170202 Malus domestica MDP0000170202 I 0.851
Bo4g150960 Brassica oleracea Bo4g150960 I 0.851
PGSC0003DMG400005101 Solanum tuberosum PGSC0003DMG400005101 I 0.851
Bra030210 Brassica rapa Bra030210 I 0.851
MDP0000159571 Malus domestica MDP0000159571 I 0.851
evm.TU.supercontig_20.63 Carica papaya evm.TU.supercontig_20.63 I 0.851
Solyc01g106460.2 Solanum lycopersicum Solyc01g106460.2 I 0.851
cassava35671.valid.m1 Manihot esculenta cassava35671.valid.m1 I 0.849
cassava37087.valid.m1 Manihot esculenta cassava37087.valid.m1 I 0.849
cassava16019.m1 Manihot esculenta cassava16019.m1 I 0.849
Pm002305 Prunus mume Pm002305 I 0.849
28179.m000478 Ricinus communis 28179.m000478 I 0.849
Pm021008 Prunus mume Pm021008 I 0.849
28179.m000479 Ricinus communis 28179.m000479 I 0.849
Cucsa.218800 Cucumis sativus Cucsa.218800 I 0.849
cassava20178.m1 Manihot esculenta cassava20178.m1 I 0.849
cassava18197.valid.m1 Manihot esculenta cassava18197.valid.m1 I 0.849
29804.m001498 Ricinus communis 29804.m001498 I 0.849
Cla000123 Citrullus lanatus Cla000123 I 0.849
Ciclev10028925m.g Citrus clementina Ciclev10028925m.g I 0.849
Gorai.007G228900 Gossypium raimondii Gorai.007G228900 I 0.849
Lus10003488.g Linum usitatissimum Lus10003488.g I 0.849
Gorai.003G034700 Gossypium raimondii Gorai.003G034700 I 0.849
Gorai.002G211500 Gossypium raimondii Gorai.002G211500 I 0.849
gene05612-v1.0-hybrid Fragaria vesca gene05612-v1.0-hybrid I 0.849
Lus10039639.g Linum usitatissimum Lus10039639.g I 0.849
MDP0000174149 Malus domestica MDP0000174149 I 0.849
orange1.1g021208m.g Citrus sinensis orange1.1g021208m.g I 0.849
orange1.1g037441m.g Citrus sinensis orange1.1g037441m.g I 0.849
MDP0000502440 Malus domestica MDP0000502440 I 0.849
MDP0000318216 Malus domestica MDP0000318216 I 0.849
MDP0000291132 Malus domestica MDP0000291132 I 0.849
gene05610-v1.0-hybrid Fragaria vesca gene05610-v1.0-hybrid I 0.849
evm.TU.supercontig_129.37 Carica papaya evm.TU.supercontig_129.37 I 0.849
Aquca_010_00012 Aquilegia coerulea Aquca_010_00012 I 0.849
Cagra.5392s0006 Capsella grandiflora Cagra.5392s0006 I 0.849
Pavir.J35103 Panicum virgatum Pavir.J35103 I 0.849
SapurV1A.0019s0910 Salix purpurea SapurV1A.0019s0910 I 0.849
estExt_fgenesh1_pg.C_420092 Physcomitrella patens estExt_fgenesh1_pg.C_420092 I 0.849
Cagra.6066s0006 Capsella grandiflora Cagra.6066s0006 I 0.849
Carubv10006834m.g Capsella rubella Carubv10006834m.g I 0.849
Eucgr.I00634 Eucalyptus grandis Eucgr.I00634 I 0.849
Eucgr.I02518 Eucalyptus grandis Eucgr.I02518 I 0.849
Ciclev10027158m.g Citrus clementina Ciclev10027158m.g I 0.849
Carubv10025041m.g Capsella rubella Carubv10025041m.g I 0.849
Pavir.J01849 Panicum virgatum Pavir.J01849 I 0.849
estExt_fgenesh1_pg.C_310143 Physcomitrella patens estExt_fgenesh1_pg.C_310143 I 0.849
PRUPE_ppa017640mg Prunus persica PRUPE_ppa017640mg I 0.849
Thhalv10025715m.g Eutrema salsugineum Thhalv10025715m.g I 0.849
GSMUA_Achr3G26180_001 Musa acuminata GSMUA_Achr3G26180_001 I 0.849
GSMUA_Achr2G08590_001 Musa acuminata GSMUA_Achr2G08590_001 I 0.849
GRMZM2G082343 Zea mays GRMZM2G082343 I 0.849
PK09122.1 Cannabis sativa PK09122.1 I 0.849
GSMUA_Achr4G03160_001 Musa acuminata GSMUA_Achr4G03160_001 I 0.849
GSMUA_Achr7G27600_001 Musa acuminata GSMUA_Achr7G27600_001 I 0.849
OBART03G32580 Oryza barthii OBART03G32580 I 0.849
OGLUM03G29200 Oryza glumaepatula OGLUM03G29200 I 0.849
OBART03G29020 Oryza barthii OBART03G29020 I 0.849
LPERR03G27220 Leersia perrieri LPERR03G27220 I 0.849
GSMUA_AchrUn_randomG15440_001 Musa acuminata GSMUA_AchrUn_randomG15440_001 I 0.849
GRMZM2G019806 Zea mays GRMZM2G019806 I 0.849
PK11573.1 Cannabis sativa PK11573.1 I 0.849
BGIOSGA013493 Oryza indica BGIOSGA013493 I 0.849
Bo1g003350 Brassica oleracea Bo1g003350 I 0.849
BGIOSGA013293 Oryza indica BGIOSGA013293 I 0.849
BHLH25 Arabidopsis thaliana AT4G37850 I 0.849
PDK_20s1524891g002 Phoenix dactylifera PDK_20s1524891g002 I 0.849
Bo3g153150 Brassica oleracea Bo3g153150 I 0.849
Bra010617 Brassica rapa Bra010617 I 0.849
chr2.CM0021.410.nc Lotus japonicus chr2.CM0021.410.nc I 0.849
GLYMA11G04690 Glycine max GLYMA11G04690 I 0.849
fgenesh2_kg.4__196__AT2G22750.1 Arabidopsis lyrata fgenesh2_kg.4__196__AT2G22750.1 I 0.849
F775_11133 Aegilops tauschii F775_11133 I 0.849
Bra011790 Brassica rapa Bra011790 I 0.849
OMERI03G29350 Oryza meridionalis OMERI03G29350 I 0.849
OGLUM03G32210 Oryza glumaepatula OGLUM03G32210 I 0.849
Si022171m.g Setaria italica Si022171m.g I 0.849
AMTR_s00033p00078670 Amborella trichopoda AMTR_s00033p00078670 I 0.849
SELMODRAFT_48361 Selaginella moellendorffii SELMODRAFT_48361 I 0.849
SELMODRAFT_34848 Selaginella moellendorffii SELMODRAFT_34848 I 0.849
PRUPE_ppa008130mg Prunus persica PRUPE_ppa008130mg I 0.849
Sb01g009590 Sorghum bicolor Sb01g009590 I 0.849
Si036393m.g Setaria italica Si036393m.g I 0.849
SapurV1A.3034s0010 Salix purpurea SapurV1A.3034s0010 I 0.849
VIT_03s0088g01240 Vitis vinifera VIT_03s0088g01240 I 0.849
VIT_07s0205g00160 Vitis vinifera VIT_07s0205g00160 I 0.849
TRIUR3_29908 Triticum urartu TRIUR3_29908 I 0.849
SapurV1A.0279s0180 Salix purpurea SapurV1A.0279s0180 I 0.849
TCM_000895 Theobroma cacao TCM_000895 I 0.849
POPTR_0009s08500 Populus trichocarpa POPTR_0009s08500 I 0.849
POPTR_0005s09810 Populus trichocarpa POPTR_0005s09810 I 0.849
ORGLA03G0268800 Oryza glaberrima ORGLA03G0268800 I 0.849
OPUNC03G29750 Oryza punctata OPUNC03G29750 I 0.849
OPUNC03G26580 Oryza punctata OPUNC03G26580 I 0.849
ONIVA03G34090 Oryza nivara ONIVA03G34090 I 0.849
ONIVA03G30250 Oryza nivara ONIVA03G30250 I 0.849
ORGLA03G0295100 Oryza glaberrima ORGLA03G0295100 I 0.849
POPTR_0001s29400 Populus trichocarpa POPTR_0001s29400 I 0.849
OS03G0725800 Oryza sativa OS03G0725800 I 0.849
ORUFI03G33950 Oryza rufipogon ORUFI03G33950 I 0.849
ORUFI03G30180 Oryza rufipogon ORUFI03G30180 I 0.849
Eucgr.H02390 Eucalyptus grandis Eucgr.H02390 I 0.848
Ca_02263 Cicer arietinum Ca_02263 I 0.848
Eucgr.H02389 Eucalyptus grandis Eucgr.H02389 I 0.848
Pavir.J26871 Panicum virgatum Pavir.J26871 I 0.847
Si024086m.g Setaria italica Si024086m.g I 0.847
GRMZM2G036554 Zea mays GRMZM2G036554 I 0.847
OS03G0671800 Oryza sativa OS03G0671800 I 0.847
GLYMA17G16720 Glycine max GLYMA17G16720 I 0.846
GLYMA05G23530 Glycine max GLYMA05G23530 I 0.846
LjT17L12.80.nd Lotus japonicus LjT17L12.80.nd I 0.846
SapurV1A.0821s0050 Salix purpurea SapurV1A.0821s0050 I 0.846
TCM_006357 Theobroma cacao TCM_006357 I 0.846
Lus10020503.g Linum usitatissimum Lus10020503.g I 0.846
Lus10012457.g Linum usitatissimum Lus10012457.g I 0.846
mg004185m Mimulus guttatus mg004185m I 0.845
mg008709m Mimulus guttatus mg008709m I 0.845
Lus10039640.g Linum usitatissimum Lus10039640.g I 0.844
GSMUA_Achr3G00370_001 Musa acuminata GSMUA_Achr3G00370_001 I 0.843
Thhalv10007139m.g Eutrema salsugineum Thhalv10007139m.g I 0.843
fgenesh2_kg.1__101__AT1G01260.1 Arabidopsis lyrata fgenesh2_kg.1__101__AT1G01260.1 I 0.843
Carubv10008640m.g Capsella rubella Carubv10008640m.g I 0.843
Bostr.5325s0049 Boechera stricta Bostr.5325s0049 I 0.843
BHLH13 Arabidopsis thaliana AT1G01260 D 0.843
Cagra.1968s0070 Capsella grandiflora Cagra.1968s0070 I 0.843
Eucgr.H02398 Eucalyptus grandis Eucgr.H02398 I 0.838
TCM_000894 Theobroma cacao TCM_000894 I 0.838
Gorai.003G034600 Gossypium raimondii Gorai.003G034600 I 0.838
Gorai.007G229000 Gossypium raimondii Gorai.007G229000 I 0.838