Cmyd_10011837 (Chelonia mydas)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cmyd_10011837 T047090_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Npas2
M01731_2.00
Mus musculus
NVCACGTGBN

NVCACGTGBN
PBM
Weirauch et al.(2014)
pTH5457
0.882 0.979
NPAS2
M04158_2.00
Homo sapiens
NRCACGTGKH

DMCACGTGYN
SELEX
Yin et al.(2017)
NPAS2_eDBD_HT-SELEX
0.882 0.979
Npas2
M09468_2.00
Mus musculus
VKCACRTGKM

KMCAYGTGMB
Misc
Heinz et al.(2010)
Liver-NPAS2_GSE39860
0.882 0.979
NPAS2
M04159_2.00
Homo sapiens
DVCRCRTGKH

DMCAYGYGBH
SELEX
Yin et al.(2017)
NPAS2_eDBD_Methyl-HT-SELEX
0.882 0.979
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10011837 bHLH 25 72

Links

Other bHLH family TFs
Other Chelonia mydas TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CAGL0E01331g Candida glabrata CAGL0E01331g I 0.000
KAFR_0B05740 Kazachstania africana KAFR_0B05740 I 0.000
KNAG_0A05170 Kazachstania naganishii KNAG_0A05170 I 0.000
LALA0_S07e04896g Lachancea lanzarotensis LALA0_S07e04896g N 0.000
NCAS_0B03600 Naumovozyma castellii NCAS_0B03600 I 0.000
4131_Multiple Saccharomyces bayanus 4131_Multiple I 0.000
Scas_Contig693.31 Saccharomyces castellii Scas_Contig693.31 I 0.000
ACE2 Saccharomyces cerevisiae YLR131C D 0.000
SWI5 Saccharomyces cerevisiae YDR146C D 0.000
3580_YDR146C Saccharomyces mikatae 3580_YDR146C I 0.000
14324_YLR131C Saccharomyces paradoxus 14324_YLR131C I 0.000
4284_YDR146C Saccharomyces paradoxus 4284_YDR146C I 0.000
TBLA_0H01260 Tetrapisispora blattae TBLA_0H01260 N 0.000
TDEL_0F04510 Torulaspora delbrueckii TDEL_0F04510 I 0.000
Kpol_1036p70 Vanderwaltozyma polyspora Kpol_1036p70 I 0.000
ZBAI_00695 Zygosaccharomyces bailii ZBAI_00695 N 0.000
ZBAI_05991 Zygosaccharomyces bailii ZBAI_05991 N 0.000
ZYRO0F10428g Zygosaccharomyces rouxii ZYRO0F10428g N 0.000