CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000393788-D1
(
Bos grunniens
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
ENSP00000393788-D1
T047290_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SOHLH2
M01113_2.00
Homo sapiens
BCACGDRNN
NNYHCGTGV
PBM
Lambert et al.(2019)
pTH11270
0.882
0.920
SOHLH2
M04096_2.00
Homo sapiens
NBCACGTGCN
NGCACGTGVN
SELEX
Yin et al.(2017)
SOHLH2_eDBD_HT-SELEX
0.882
0.920
SOHLH2
M04097_2.00
Homo sapiens
NNMACGWDNN
NNHWCGTKNN
SELEX
Yin et al.(2017)
SOHLH2_eDBD_Methyl-HT-SELEX
0.882
0.920
Sohlh2
M01733_2.00
Mus musculus
NNHNCGTGVN
NBCACGNDNN
PBM
Weirauch et al.(2014)
pTH5058
0.881
0.840
Sohlh2
M09890_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEB1_01
0.881
0.840
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000393788-D1
bHLH
189
238
LLHSNKEKLRRERIKYCCEQLRTLLPYMKGRKNDAASVLEATVDYVKFVR
Links
Other
bHLH
family TFs
Other
Bos grunniens
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy