CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10002205m.g
(
Citrus clementina
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Ciclev10002205m.g
T049469_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10002205m
bHLH
56
105
ACKSHKEAERRRRQRINSHLSTLRTLLPNTIKTDKASLLAEVVHHVKELR
Links
Other
bHLH
family TFs
Other
Citrus clementina
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g024930m.g
Citrus sinensis
orange1.1g024930m.g
N
0.914
Cucsa.160650
Cucumis sativus
Cucsa.160650
N
0.914
Cla022500
Citrullus lanatus
Cla022500
N
0.914
GLYMA14G36010
Glycine max
GLYMA14G36010
N
0.901
GLYMA02G37720
Glycine max
GLYMA02G37720
N
0.901
cassava34286.m1
Manihot esculenta
cassava34286.m1
N
0.894
VIT_18s0001g07410
Vitis vinifera
VIT_18s0001g07410
N
0.894
PK01498.1
Cannabis sativa
PK01498.1
N
0.894
PRUPE_ppa026166mg
Prunus persica
PRUPE_ppa026166mg
N
0.881
MDP0000562627
Malus domestica
MDP0000562627
N
0.881
GRMZM2G526668
Zea mays
GRMZM2G526668
I
0.879
Sb07g021170
Sorghum bicolor
Sb07g021170
I
0.879
Si013911m.g
Setaria italica
Si013911m.g
I
0.879
29908.m006255
Ricinus communis
29908.m006255
N
0.864
ORUFI08G17560
Oryza rufipogon
ORUFI08G17560
I
0.859
OPUNC08G13730
Oryza punctata
OPUNC08G13730
I
0.859
ORUFI09G10670
Oryza rufipogon
ORUFI09G10670
I
0.859
ORGLA08G0137400
Oryza glaberrima
ORGLA08G0137400
I
0.859
Traes_5BL_CF90A7CAE
Triticum aestivum
Traes_5BL_CF90A7CAE
N
0.859
ONIVA09G09550
Oryza nivara
ONIVA09G09550
I
0.859
Si030496m.g
Setaria italica
Si030496m.g
N
0.859
Sb02g024460
Sorghum bicolor
Sb02g024460
N
0.859
OS08G0432800
Oryza sativa
OS08G0432800
I
0.859
OS09G0410700
Oryza sativa
OS09G0410700
I
0.859
LPERR09G06880
Leersia perrieri
LPERR09G06880
I
0.859
MLOC_12832
Hordeum vulgare
MLOC_12832
N
0.859
LPERR08G12910
Leersia perrieri
LPERR08G12910
I
0.859
BRADI4G29990
Brachypodium distachyon
BRADI4G29990
N
0.859
GRMZM2G176141
Zea mays
GRMZM2G176141
N
0.859
GRMZM2G107276
Zea mays
GRMZM2G107276
I
0.859
ONIVA08G16750
Oryza nivara
ONIVA08G16750
I
0.859
BGIOSGA029777
Oryza indica
BGIOSGA029777
I
0.859
OMERI08G12930
Oryza meridionalis
OMERI08G12930
I
0.859
OMERI09G07780
Oryza meridionalis
OMERI09G07780
I
0.859
OBART08G15650
Oryza barthii
OBART08G15650
I
0.859
OGLUM08G16400
Oryza glumaepatula
OGLUM08G16400
I
0.859
BGIOSGA026937
Oryza indica
BGIOSGA026937
I
0.859
Gorai.009G230000
Gossypium raimondii
Gorai.009G230000
N
0.858
Ca_14981
Cicer arietinum
Ca_14981
N
0.857
MTR_5g066080
Medicago truncatula
MTR_5g066080
N
0.857
F775_10096
Aegilops tauschii
F775_10096
I
0.855
TRIUR3_31897
Triticum urartu
TRIUR3_31897
I
0.855
MLOC_66385
Hordeum vulgare
MLOC_66385
I
0.855
Traes_4AS_DD16F89E7
Triticum aestivum
Traes_4AS_DD16F89E7
I
0.855
Traes_4DL_7BD3165FB
Triticum aestivum
Traes_4DL_7BD3165FB
I
0.855
Traes_4BL_A2B32FCEE
Triticum aestivum
Traes_4BL_A2B32FCEE
I
0.855
BRADI3G36610
Brachypodium distachyon
BRADI3G36610
N
0.851
Pavir.Bb02155
Panicum virgatum
Pavir.Bb02155
N
0.847
Pavir.Ba01821
Panicum virgatum
Pavir.Ba01821
N
0.847
AMTR_s00002p00019320
Amborella trichopoda
AMTR_s00002p00019320
I
0.846
PGSC0003DMG400023577
Solanum tuberosum
PGSC0003DMG400023577
N
0.846
Solyc04g014360.2
Solanum lycopersicum
Solyc04g014360.2
N
0.846
Aquca_007_00571
Aquilegia coerulea
Aquca_007_00571
N
0.846
Lus10015734.g
Linum usitatissimum
Lus10015734.g
I
0.841
Lus10003471.g
Linum usitatissimum
Lus10003471.g
I
0.841
Lus10042017.g
Linum usitatissimum
Lus10042017.g
N
0.839
Thhalv10027500m.g
Eutrema salsugineum
Thhalv10027500m.g
N
0.838
BHLH131
Arabidopsis thaliana
AT4G38070
N
0.838
Al_scaffold_0007_233
Arabidopsis lyrata
Al_scaffold_0007_233
N
0.838
gene20797-v1.0-hybrid
Fragaria vesca
gene20797-v1.0-hybrid
N
0.838