Pavir.Ba01821 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ba01821 T050683_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba01821.1.p bHLH 120 169

Links

Other bHLH family TFs
Other Panicum virgatum TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Bb02155 Panicum virgatum Pavir.Bb02155 N 0.914
MLOC_12832 Hordeum vulgare MLOC_12832 N 0.902
Sb02g024460 Sorghum bicolor Sb02g024460 N 0.902
GRMZM2G176141 Zea mays GRMZM2G176141 N 0.902
Si030496m.g Setaria italica Si030496m.g N 0.902
Traes_5BL_CF90A7CAE Triticum aestivum Traes_5BL_CF90A7CAE N 0.902
OMERI08G12930 Oryza meridionalis OMERI08G12930 I 0.891
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I 0.891
OBART08G15650 Oryza barthii OBART08G15650 I 0.891
OMERI09G07780 Oryza meridionalis OMERI09G07780 I 0.891
LPERR09G06880 Leersia perrieri LPERR09G06880 I 0.891
OPUNC08G13730 Oryza punctata OPUNC08G13730 I 0.891
OS08G0432800 Oryza sativa OS08G0432800 I 0.891
OS09G0410700 Oryza sativa OS09G0410700 I 0.891
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I 0.891
ORGLA08G0137400 Oryza glaberrima ORGLA08G0137400 I 0.891
ONIVA09G09550 Oryza nivara ONIVA09G09550 I 0.891
GRMZM2G107276 Zea mays GRMZM2G107276 I 0.891
ONIVA08G16750 Oryza nivara ONIVA08G16750 I 0.891
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I 0.891
BGIOSGA029777 Oryza indica BGIOSGA029777 I 0.891
BGIOSGA026937 Oryza indica BGIOSGA026937 I 0.891
Gorai.009G230000 Gossypium raimondii Gorai.009G230000 N 0.883
BRADI4G29990 Brachypodium distachyon BRADI4G29990 N 0.882
LPERR08G12910 Leersia perrieri LPERR08G12910 I 0.871
Si013911m.g Setaria italica Si013911m.g I 0.871
GRMZM2G526668 Zea mays GRMZM2G526668 I 0.871
Sb07g021170 Sorghum bicolor Sb07g021170 I 0.871
OLONG_011765 Oryza longistaminata OLONG_011765 N 0.870
Aquca_007_00571 Aquilegia coerulea Aquca_007_00571 N 0.867
PGSC0003DMG400023577 Solanum tuberosum PGSC0003DMG400023577 N 0.867
Solyc04g014360.2 Solanum lycopersicum Solyc04g014360.2 N 0.867
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I 0.867
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I 0.867
Ca_14981 Cicer arietinum Ca_14981 N 0.858
MTR_5g066080 Medicago truncatula MTR_5g066080 N 0.858
OB09G16590 Oryza brachyantha OB09G16590 N 0.856
OGLUM09G10310 Oryza glumaepatula OGLUM09G10310 N 0.853
PRUPE_ppa019545mg Prunus persica PRUPE_ppa019545mg N 0.851
Pm002160 Prunus mume Pm002160 N 0.851
GLYMA01G02930 Glycine max GLYMA01G02930 N 0.851
Ca_18110 Cicer arietinum Ca_18110 N 0.851
PK01498.1 Cannabis sativa PK01498.1 N 0.847
Thhalv10018758m.g Eutrema salsugineum Thhalv10018758m.g I 0.847
VIT_18s0001g07410 Vitis vinifera VIT_18s0001g07410 N 0.847
AMTR_s00010p00144270 Amborella trichopoda AMTR_s00010p00144270 I 0.847
chr2.CM0749.390.nc Lotus japonicus chr2.CM0749.390.nc I 0.847
Solyc05g009880.2 Solanum lycopersicum Solyc05g009880.2 I 0.847
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I 0.847
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I 0.847
Ca_24775 Cicer arietinum Ca_24775 I 0.847
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I 0.847
TRIUR3_31897 Triticum urartu TRIUR3_31897 I 0.847
Cucsa.160650 Cucumis sativus Cucsa.160650 N 0.847
Lus10034271.g Linum usitatissimum Lus10034271.g I 0.847
Thhalv10004524m.g Eutrema salsugineum Thhalv10004524m.g I 0.847
Ciclev10002205m.g Citrus clementina Ciclev10002205m.g N 0.847
Lus10041493.g Linum usitatissimum Lus10041493.g I 0.847
orange1.1g024930m.g Citrus sinensis orange1.1g024930m.g N 0.847
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I 0.847
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.847
Carubv10020515m.g Capsella rubella Carubv10020515m.g I 0.847
Carubv10017470m.g Capsella rubella Carubv10017470m.g I 0.847
Bostr.0556s0241 Boechera stricta Bostr.0556s0241 I 0.847
cassava34286.m1 Manihot esculenta cassava34286.m1 N 0.847
Cla022500 Citrullus lanatus Cla022500 N 0.847
Bostr.26959s0001 Boechera stricta Bostr.26959s0001 I 0.847
Solyc04g006990.2 Solanum lycopersicum Solyc04g006990.2 I 0.847
Cagra.1157s0003 Capsella grandiflora Cagra.1157s0003 I 0.847
Cagra.0417s0002 Capsella grandiflora Cagra.0417s0002 I 0.847
Cla000223 Citrullus lanatus Cla000223 I 0.847
SELMODRAFT_412681 Selaginella moellendorffii SELMODRAFT_412681 I 0.847
Bra026510 Brassica rapa Bra026510 I 0.847
OBART03G11320 Oryza barthii OBART03G11320 I 0.847
OB03G21490 Oryza brachyantha OB03G21490 I 0.847
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.847
Bra025158 Brassica rapa Bra025158 I 0.847
Bra004338 Brassica rapa Bra004338 I 0.847
Si039730m.g Setaria italica Si039730m.g I 0.847
MLOC_66385 Hordeum vulgare MLOC_66385 I 0.847
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.847
GLYMA01G22530 Glycine max GLYMA01G22530 I 0.847
BHLH32 Arabidopsis lyrata fgenesh2_kg.5__324__AT3G25710.1 I 0.847
GLYMA02G11190 Glycine max GLYMA02G11190 I 0.847
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.847
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.847
F775_10096 Aegilops tauschii F775_10096 I 0.847
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.847
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.847
BHLH32 Arabidopsis thaliana AT3G25710 I 0.847
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.847
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.847
Bra004015 Brassica rapa Bra004015 I 0.847
OS03G0260600 Oryza sativa OS03G0260600 I 0.847
PGSC0003DMG400000824 Solanum tuberosum PGSC0003DMG400000824 I 0.847
Bo2g138630 Brassica oleracea Bo2g138630 I 0.847
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.847
SELMODRAFT_417246 Selaginella moellendorffii SELMODRAFT_417246 I 0.847
BHLH30 Arabidopsis thaliana AT1G68810 I 0.847
Bo7g081980 Brassica oleracea Bo7g081980 I 0.847
Bo6g108270 Brassica oleracea Bo6g108270 I 0.847
fgenesh2_kg.2__1138__AT1G68810.1 Arabidopsis lyrata fgenesh2_kg.2__1138__AT1G68810.1 I 0.847
BRADI3G36610 Brachypodium distachyon BRADI3G36610 N 0.843
Thhalv10027500m.g Eutrema salsugineum Thhalv10027500m.g N 0.842
Gorai.007G059100 Gossypium raimondii Gorai.007G059100 N 0.842
Carubv10003996m.g Capsella rubella Carubv10003996m.g N 0.842
Cagra.5414s0046 Capsella grandiflora Cagra.5414s0046 N 0.842
BHLH131 Arabidopsis thaliana AT4G38070 N 0.842
evm.TU.supercontig_55.51 Carica papaya evm.TU.supercontig_55.51 N 0.842
Bostr.25542s0212 Boechera stricta Bostr.25542s0212 N 0.842
Al_scaffold_0007_233 Arabidopsis lyrata Al_scaffold_0007_233 N 0.842
Bra010635 Brassica rapa Bra010635 N 0.842
Ciclev10020323m.g Citrus clementina Ciclev10020323m.g I 0.841
orange1.1g026943m.g Citrus sinensis orange1.1g026943m.g I 0.841