Gorai.001G012400 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.001G012400 T049916_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15505.1
M01125_2.00 		Cannabis sativa
NRCACGTGYN
NRCACGTGYN		 PBM
Lambert et al.(2019)
pTH10268 		0.839 0.776
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G012400.1 bHLH 337 385
Gorai.001G012400.2 bHLH 303 351

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.871
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.871
MDP0000782908 Malus domestica MDP0000782908 I 0.871
Cla017100 Citrullus lanatus Cla017100 I 0.871
TCM_037645 Theobroma cacao TCM_037645 I 0.856
mgf018190m Mimulus guttatus mgf018190m I 0.851
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I 0.850
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.850
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.850
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.850
29912.m005337 Ricinus communis 29912.m005337 I 0.849
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.849
cassava46879.m1 Manihot esculenta cassava46879.m1 I 0.849
MDP0000252899 Malus domestica MDP0000252899 I 0.849
SapurV1A.0108s0270 Salix purpurea SapurV1A.0108s0270 I 0.849
MDP0000119495 Malus domestica MDP0000119495 I 0.849
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I 0.847
AMTR_s00064p00208400 Amborella trichopoda AMTR_s00064p00208400 I 0.847
Pm027191 Prunus mume Pm027191 I 0.847
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I 0.847
PGSC0003DMG402030621 Solanum tuberosum PGSC0003DMG402030621 I 0.845
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.842
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.842
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.842
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.842
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.842
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.842
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.842
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.839
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.839
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.839
OS04G0557200 Oryza sativa OS04G0557200 N 0.839
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.839
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.839
PDK_20s1464821g001 Phoenix dactylifera PDK_20s1464821g001 I 0.839
PK15505.1 Cannabis sativa PK15505.1 D 0.839
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N 0.839
TRIUR3_35186 Triticum urartu TRIUR3_35186 N 0.839
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.839
Si000845m.g Setaria italica Si000845m.g I 0.839
Si012401m.g Setaria italica Si012401m.g I 0.839
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.839
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.839
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.839
LPERR04G17380 Leersia perrieri LPERR04G17380 N 0.839
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N 0.839
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.839
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.839
LPERR08G11070 Leersia perrieri LPERR08G11070 N 0.839
OB04G28350 Oryza brachyantha OB04G28350 N 0.839
OB01G30110 Oryza brachyantha OB01G30110 N 0.839
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.839
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.839
F775_19744 Aegilops tauschii F775_19744 N 0.839
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.839
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.839
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.839
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.839
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.839
F775_18830 Aegilops tauschii F775_18830 N 0.839
F775_10624 Aegilops tauschii F775_10624 N 0.839
OB04G28380 Oryza brachyantha OB04G28380 N 0.839
OB04G28390 Oryza brachyantha OB04G28390 N 0.839
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.839
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.839
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.839
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.839
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.839
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.839
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.839
OMERI01G18860 Oryza meridionalis OMERI01G18860 N 0.839
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.839
OBART04G21370 Oryza barthii OBART04G21370 N 0.839
OBART04G21320 Oryza barthii OBART04G21320 N 0.839
OBART01G20350 Oryza barthii OBART01G20350 N 0.839
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.839
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.839
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.839
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.839
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.839