CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XBP1
(
Bos taurus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSBTAG00000005970
T059066_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XBP1
M02825_2.00
Homo sapiens
GVTGACGTCABB
VVTGACGTCABC
SELEX
Jolma et al.(2013)
XBP1_1
0.872
1.000
XBP1
M02826_2.00
Homo sapiens
GVTGACGTGKCVHW
WDBGMCACGTCABC
SELEX
Jolma et al.(2013)
XBP1_2
0.872
1.000
XBP1
M02730_2.00
Homo sapiens
GACGTGKCNNW
WNNGMCACGTC
SELEX
Jolma et al.(2010)
XBP1_monomer
0.872
1.000
XBP1
M04231_2.00
Homo sapiens
NVTGACGTGKNN
NNMCACGTCABN
SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_1
0.872
1.000
XBP1
M04232_2.00
Homo sapiens
NVTKACGTMABV
BVTKACGTMABN
SELEX
Yin et al.(2017)
XBP1_FL_HT-SELEX_2
0.872
1.000
XBP1
M04010_2.00
Homo sapiens
GRTGACGTGKCV
BGMCACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
XBP1.1
0.872
1.000
XBP1
M04011_2.00
Homo sapiens
GRTGACGTCAYS
SRTGACGTCAYC
SELEX
Rodriguez-Martinez et al.(2017)
XBP1.2
0.872
1.000
XBP1
M04012_2.00
Homo sapiens
KGMCACGTGKMCH
DGKMCACGTGKCM
SELEX
Rodriguez-Martinez et al.(2017)
XBP1.3
0.872
1.000
XBP1
M09932_2.00
Homo sapiens
NHNWDHRVTGACGTGKHNHWDDHB
VDHHWDNDMCACGTCABYDHWNDN
Transfac
Matys et al.(2006)
V$HTF_01
0.872
1.000
XBP1
M09933_2.00
Homo sapiens
DBRHTKACGTGKHNHWD
HWDNDMCACGTMADYVH
Transfac
Matys et al.(2006)
V$XBP1_01
0.872
1.000
XBP1
M04233_2.00
Homo sapiens
BKMCACRTCAYS
SRTGAYGTGKMV
SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_1
0.872
1.000
XBP1
M04234_2.00
Homo sapiens
VVTGWCRTCAYS
SRTGAYGWCABB
SELEX
Yin et al.(2017)
XBP1_FL_Methyl-HT-SELEX_2
0.872
1.000
Xbp1
M00757_2.00
Mus musculus
NNHBAYDNNN
NNNHRTVDNN
PBM
Weirauch et al.(2013)
pTH2852
0.872
0.969
Xbp1
M01802_2.00
Mus musculus
NHNACGYNN
NNRCGTNDN
PBM
Weirauch et al.(2014)
pTH5019
0.872
0.969
Xbp1
M08818_2.00
Mus musculus
GACGTGKCMHWD
HWDKGMCACGTC
Misc
Kulakovskiy et al.(2013)
XBP1_MOUSE.H11MO.0.C
0.872
0.969
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000007835
bZIP
68
131
SPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQ
Links
Other
bZIP
family TFs
Other
Bos taurus
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL002763
Aedes aegypti
AAEL002763
N
0.000
AAEL004799
Aedes aegypti
AAEL004799
N
0.000
AAEL015495
Aedes aegypti
AAEL015495
N
0.000
AATE004258
Anopheles atroparvus
AATE004258
N
0.000
AATE004381
Anopheles atroparvus
AATE004381
N
0.000
ACEP11966
Atta cephalotes
ACEP11966
N
0.000
ACOM042270
Anopheles coluzzii
ACOM042270
N
0.000
ACUA022483
Anopheles culicifacies
ACUA022483
N
0.000
ACUA027622
Anopheles culicifacies
ACUA027622
N
0.000
ACYPI006067
Acyrthosiphon pisum
ACYPI006067
N
0.000
AFAF002247
Anopheles farauti
AFAF002247
N
0.000
AFAF016561
Anopheles farauti
AFAF016561
N
0.000
AFUN003754
Anopheles funestus
AFUN003754
N
0.000
AFUN003758
Anopheles funestus
AFUN003758
N
0.000
AGAP002082
Anopheles gambiae
AGAP002082
N
0.000
AGAP002083
Anopheles gambiae
AGAP002083
I
0.000
AMAM007515
Anopheles maculatus
AMAM007515
N
0.000
AMAM023802
Anopheles maculatus
AMAM023802
N
0.000
AMEC016152
Anopheles melas
AMEC016152
N
0.000
AMEC018985
Anopheles melas
AMEC018985
N
0.000
AMEC019868
Anopheles melas
AMEC019868
N
0.000
AMEM000733
Anopheles merus
AMEM000733
N
0.000
AMEM001627
Anopheles merus
AMEM001627
N
0.000
ASIS002621
Anopheles sinensis
ASIS002621
N
0.000
ASIS011627
Anopheles sinensis
ASIS011627
N
0.000
Cflo_10706--XP_392003.1_APIME
Camponotus floridanus
Cflo_10706--XP_392003.1_APIME
N
0.000
CLEC008150
Cimex lectularius
CLEC008150
N
0.000
CPIJ013161
Culex quinquefasciatus
CPIJ013161
N
0.000
CPIJ020207
Culex quinquefasciatus
CPIJ020207
N
0.000
CpipJ_CPIJ013161
Culex pipiens
CpipJ_CPIJ013161
N
0.000
CpipJ_CPIJ020207
Culex pipiens
CpipJ_CPIJ020207
N
0.000
GA26220
Drosophila pseudoobscura
FBgn0247595
I
0.000
GB54118
Apis mellifera
GB54118
N
0.000
GF17309
Drosophila ananassae
FBgn0094327
N
0.000
GI23490
Drosophila mojavensis
FBgn0146216
N
0.000
GJ10241
Drosophila virilis
FBgn0197528
N
0.000
GK11085
Drosophila willistoni
FBgn0213096
N
0.000
GM10491
Drosophila sechellia
FBgn0165439
N
0.000
L798_13150
Zootermopsis nevadensis
L798_13150
N
0.000
LLOJ002296
Lutzomyia longipalpis
LLOJ002296
N
0.000
MDOA008356
Musca domestica
MDOA008356
N
0.000
NV18441
Nasonia vitripennis
NV18441
N
0.000
rn
Drosophila melanogaster
FBgn0267337
D
0.000
RPRC000740
Rhodnius prolixus
RPRC000740
N
0.000
SINV21632
Solenopsis invicta
SINV21632
N
0.000
SMAR014468
Strigamia maritima
SMAR014468
N
0.000
TC016018
Tribolium castaneum
TC016018
N
0.000
YQE_06536
Dendroctonus ponderosae
YQE_06536
N
0.000