atf7b (Danio rerio)
bZIP,C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1)
PF00096 (zf-C2H2) 		IPR011616
IPR007087 		ENSDARG00000055481 T075497_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and cAMP response element binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Is expressed in head. Orthologous to human ATF7 (activating transcription factor 7). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF7
M02872_2.00 		Homo sapiens
NDRTGACGTCATNN
NNATGACGTCAYHN		 SELEX
Jolma et al.(2013)
ATF7_1 		0.793 0.793
ATF7
M04382_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF7_eDBD_HT-SELEX 		0.793 0.793
Atf7
M09499_2.00 		Mus musculus
NNVTGACRTCAB
VTGAYGTCABNN		 Misc
Heinz et al.(2010)
3T3L1-Atf7_GSE56872 		0.793 0.793
ATF7
M04383_2.00 		Homo sapiens
NRTKAYGTMATN
NATKACRTMAYN		 SELEX
Yin et al.(2017)
ATF7_eDBD_Methyl-HT-SELEX 		0.793 0.793
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000072305 C2H2 ZF 7 31
ENSDARP00000072305 bZIP 286 349
ENSDARP00000094817 C2H2 ZF 7 31
ENSDARP00000094817 bZIP 318 381
ENSDARP00000120632 C2H2 ZF 7 31
ENSDARP00000120632 bZIP 296 359

Links

Other bZIP,C2H2 ZF family TFs
Other Danio rerio TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000001508 Astyanax mexicanus ENSAMXG00000001508 I 0.897
ENSAMXG00000004711 Astyanax mexicanus ENSAMXG00000004711 I 0.839
ENSPFOG00000012991 Poecilia formosa ENSPFOG00000012991 I 0.828
atf7a Oryzias latipes ENSORLG00000006799 I 0.828
ENSXMAG00000010537 Xiphophorus maculatus ENSXMAG00000010537 I 0.828
ENSPFOG00000009541 Poecilia formosa ENSPFOG00000009541 I 0.816
ENSLOCG00000006882 Lepisosteus oculatus ENSLOCG00000006882 I 0.816
atf7a Gasterosteus aculeatus ENSGACG00000008417 I 0.816
ENSONIG00000011905 Oreochromis niloticus ENSONIG00000011905 I 0.816
ENSXMAG00000002160 Xiphophorus maculatus ENSXMAG00000002160 I 0.816
atf7b Gasterosteus aculeatus ENSGACG00000000679 I 0.805
atf7b Takifugu rubripes ENSTRUG00000007560 I 0.805
atf7a Takifugu rubripes ENSTRUG00000015923 I 0.805
atf7 Xenopus tropicalis XB-GENE-1216213 I 0.805
atf7a Tetraodon nigroviridis ENSTNIG00000015107 I 0.805
ENSOGAG00000001748 Otolemur garnettii ENSOGAG00000001748 I 0.793
ENSPSIG00000005177 Pelodiscus sinensis ENSPSIG00000005177 I 0.793
ATF7 Pan troglodytes ENSPTRG00000005022 I 0.793
ENSPCAG00000005455 Procavia capensis ENSPCAG00000005455 I 0.793
ENSOPRG00000011431 Ochotona princeps ENSOPRG00000011431 I 0.793
ENSSSCG00000000278 Sus scrofa ENSSSCG00000000278 I 0.793
ENSTBEG00000014854 Tupaia belangeri ENSTBEG00000014854 I 0.793
atf7b Tetraodon nigroviridis ENSTNIG00000014570 I 0.793
ENSTTRG00000017181 Tursiops truncatus ENSTTRG00000017181 I 0.793
ENSP00000329212 Macaca fascicularis ENSP00000329212 I 0.793
ENSSTOG00000006788 Ictidomys tridecemlineatus ENSSTOG00000006788 I 0.793
Atf7 Mus musculus ENSMUSG00000099083 D 0.793
Atf7 Rattus norvegicus ENSRNOG00000015269 I 0.793
ENSSARG00000001019 Sorex araneus ENSSARG00000001019 I 0.793
XP_002935730 Xenopus tropicalis XP_002935730 I 0.793
ENSPVAG00000012289 Pteropus vampyrus ENSPVAG00000012289 I 0.793
ENSOCUG00000005707 Oryctolagus cuniculus ENSOCUG00000005707 I 0.793
ENSNLEG00000017688 Nomascus leucogenys ENSNLEG00000017688 I 0.793
ENSCPOG00000000973 Cavia porcellus ENSCPOG00000000973 I 0.793
atf7a Danio rerio ENSDARG00000011298 I 0.793
ENSDNOG00000008735 Dasypus novemcinctus ENSDNOG00000008735 I 0.793
ENSETEG00000002463 Echinops telfairi ENSETEG00000002463 I 0.793
ENSCJAG00000018699 Callithrix jacchus ENSCJAG00000018699 I 0.793
ENSCHOG00000010269 Choloepus hoffmanni ENSCHOG00000010269 I 0.793
ENSOARG00000016413 Ovis aries ENSOARG00000016413 I 0.793
ENSAMEG00000012625 Ailuropoda melanoleuca ENSAMEG00000012625 I 0.793
ENSBTAG00000005863 Bos taurus ENSBTAG00000005863 I 0.793
ENSCAFG00000006726 Canis familiaris ENSCAFG00000006726 I 0.793
ATF7 Homo sapiens ENSG00000170653 D 0.793
ENSCSAG00000005473 Chlorocebus sabaeus ENSCSAG00000005473 I 0.793
ENSLAFG00000002626 Loxodonta africana ENSLAFG00000002626 I 0.793
AC023509.3 Homo sapiens ENSG00000267281 I 0.793
ENSMICG00000011677 Microcebus murinus ENSMICG00000011677 I 0.793
Gm28047 Mus musculus ENSMUSG00000052414 I 0.793
ENSLACG00000004713 Latimeria chalumnae ENSLACG00000004713 I 0.793
ENSMEUG00000001927 Macropus eugenii ENSMEUG00000001927 I 0.793
ENSGALG00000003038 Gallus gallus ENSGALG00000003038 I 0.793
ATF7 Gorilla gorilla ENSGGOG00000015195 I 0.793
atf2 Takifugu rubripes ENSTRUG00000017553 I 0.782
ENSACAG00000001199 Anolis carolinensis ENSACAG00000001199 I 0.782
ENSLOCG00000007222 Lepisosteus oculatus ENSLOCG00000007222 I 0.782
atf2 Tetraodon nigroviridis ENSTNIG00000016954 I 0.779
ENSPFOG00000013792 Poecilia formosa ENSPFOG00000013792 I 0.770
ENSXMAG00000000397 Xiphophorus maculatus ENSXMAG00000000397 I 0.770
atf2 Gasterosteus aculeatus ENSGACG00000004600 I 0.759
Ocbimv22037954m.g Octopus bimaculoides Ocbimv22037954m.g I 0.747
atf2.S Xenopus laevis XB-GENE-6078170 I 0.713
creb5b Tetraodon nigroviridis ENSTNIG00000018431 I 0.701
SMAR008245 Strigamia maritima SMAR008245 I 0.701
NEMVEDRAFT_v1g34679 Nematostella vectensis NEMVEDRAFT_v1g34679 I 0.701
ENSTRUG00000015448 Takifugu rubripes ENSTRUG00000015448 I 0.701