CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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atf2
(
Gasterosteus aculeatus
)
bZIP,C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
PF00096 (zf-C2H2)
IPR011616
IPR007087
ENSGACG00000004600
T075503_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF7
M02872_2.00
Homo sapiens
NDRTGACGTCATNN
NNATGACGTCAYHN
SELEX
Jolma et al.(2013)
ATF7_1
0.839
0.839
ATF7
M04382_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF7_eDBD_HT-SELEX
0.839
0.839
Atf7
M09499_2.00
Mus musculus
NNVTGACRTCAB
VTGAYGTCABNN
Misc
Heinz et al.(2010)
3T3L1-Atf7_GSE56872
0.839
0.839
ATF7
M04383_2.00
Homo sapiens
NRTKAYGTMATN
NATKACRTMAYN
SELEX
Yin et al.(2017)
ATF7_eDBD_Methyl-HT-SELEX
0.839
0.839
ATF2
M04250_2.00
Homo sapiens
NVTKACGTMABN
NVTKACGTMABN
SELEX
Yin et al.(2017)
ATF2_eDBD_HT-SELEX
0.736
0.736
ATF2
M04252_2.00
Homo sapiens
NVYKACGTCABN
NVTGACGTMRBN
SELEX
Yin et al.(2017)
ATF2_FL_HT-SELEX
0.736
0.736
ATF2
M04017_2.00
Homo sapiens
MTKACGTMAY
RTKACGTMAK
SELEX
Rodriguez-Martinez et al.(2017)
ATF2.1
0.736
0.736
ATF2
M08788_2.00
Homo sapiens
VTGACVTCABY
RVTGABGTCAB
Misc
Kulakovskiy et al.(2013)
ATF2_HUMAN.H11MO.0.B
0.736
0.736
ATF2
M09939_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF2_Q5
0.736
0.736
ATF2
M09940_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF2_Q6
0.736
0.736
ATF2
M09941_2.00
Homo sapiens
TTACGTAA
TTACGTAA
Transfac
Matys et al.(2006)
V$CREBP1_01
0.736
0.736
ATF2
M09942_2.00
Homo sapiens
VSTGACGTMASN
NSTKACGTCASB
Transfac
Matys et al.(2006)
V$CREBP1_Q2
0.736
0.736
ATF2
M04251_2.00
Homo sapiens
NRTKACRTCAYN
NRTGAYGTMAYN
SELEX
Yin et al.(2017)
ATF2_eDBD_Methyl-HT-SELEX
0.736
0.736
ATF2
M04253_2.00
Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN
SELEX
Yin et al.(2017)
ATF2_FL_Methyl-HT-SELEX
0.736
0.736
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000006075
C2H2 ZF
11
35
FQCTAPGCGQRFTNEDHLAVHKHKH
ENSGACP00000006083
C2H2 ZF
7
31
FQCTAPGCGQRFTNEDHLAVHKHKH
ENSGACP00000006083
bZIP
332
395
NPDEKRRKFLERNRAAASRCRQKRKVWVQSLEKKSEDLNSMNGQLQNEVTLLRNEVAQLKQLLL
Links
Other
bZIP,C2H2 ZF
family TFs
Other
Gasterosteus aculeatus
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
atf2
Tetraodon nigroviridis
ENSTNIG00000016954
I
0.965
ENSXMAG00000000397
Xiphophorus maculatus
ENSXMAG00000000397
I
0.954
ENSPFOG00000013792
Poecilia formosa
ENSPFOG00000013792
I
0.954
ENSLOCG00000007222
Lepisosteus oculatus
ENSLOCG00000007222
I
0.954
atf2
Takifugu rubripes
ENSTRUG00000017553
I
0.954
ENSLACG00000004713
Latimeria chalumnae
ENSLACG00000004713
I
0.931
XP_002935730
Xenopus tropicalis
XP_002935730
I
0.931
atf2.S
Xenopus laevis
XB-GENE-6078170
I
0.851
ENSPFOG00000009541
Poecilia formosa
ENSPFOG00000009541
I
0.839
ENSOPRG00000011431
Ochotona princeps
ENSOPRG00000011431
I
0.839
ENSPCAG00000005455
Procavia capensis
ENSPCAG00000005455
I
0.839
ENSOGAG00000001748
Otolemur garnettii
ENSOGAG00000001748
I
0.839
Gm28047
Mus musculus
ENSMUSG00000052414
I
0.839
ENSLAFG00000002626
Loxodonta africana
ENSLAFG00000002626
I
0.839
ENSMICG00000011677
Microcebus murinus
ENSMICG00000011677
I
0.839
ENSMEUG00000001927
Macropus eugenii
ENSMEUG00000001927
I
0.839
ENSNLEG00000017688
Nomascus leucogenys
ENSNLEG00000017688
I
0.839
ENSSARG00000001019
Sorex araneus
ENSSARG00000001019
I
0.839
ENSTTRG00000017181
Tursiops truncatus
ENSTTRG00000017181
I
0.839
ENSXMAG00000002160
Xiphophorus maculatus
ENSXMAG00000002160
I
0.839
ENSP00000329212
Macaca fascicularis
ENSP00000329212
I
0.839
atf7
Xenopus tropicalis
XB-GENE-1216213
I
0.839
ENSTBEG00000014854
Tupaia belangeri
ENSTBEG00000014854
I
0.839
ENSSTOG00000006788
Ictidomys tridecemlineatus
ENSSTOG00000006788
I
0.839
ENSPVAG00000012289
Pteropus vampyrus
ENSPVAG00000012289
I
0.839
Atf7
Rattus norvegicus
ENSRNOG00000015269
I
0.839
ENSSSCG00000000278
Sus scrofa
ENSSSCG00000000278
I
0.839
ATF7
Pan troglodytes
ENSPTRG00000005022
I
0.839
ENSOCUG00000005707
Oryctolagus cuniculus
ENSOCUG00000005707
I
0.839
ENSCHOG00000010269
Choloepus hoffmanni
ENSCHOG00000010269
I
0.839
ENSCJAG00000018699
Callithrix jacchus
ENSCJAG00000018699
I
0.839
ENSCPOG00000000973
Cavia porcellus
ENSCPOG00000000973
I
0.839
ENSCAFG00000006726
Canis familiaris
ENSCAFG00000006726
I
0.839
ATF7
Gorilla gorilla
ENSGGOG00000015195
I
0.839
Atf7
Mus musculus
ENSMUSG00000099083
D
0.839
ENSOARG00000016413
Ovis aries
ENSOARG00000016413
I
0.839
ENSAMEG00000012625
Ailuropoda melanoleuca
ENSAMEG00000012625
I
0.839
ENSCSAG00000005473
Chlorocebus sabaeus
ENSCSAG00000005473
I
0.839
ENSBTAG00000005863
Bos taurus
ENSBTAG00000005863
I
0.839
AC023509.3
Homo sapiens
ENSG00000267281
I
0.839
ENSETEG00000002463
Echinops telfairi
ENSETEG00000002463
I
0.839
ENSDNOG00000008735
Dasypus novemcinctus
ENSDNOG00000008735
I
0.839
ATF7
Homo sapiens
ENSG00000170653
D
0.839
ENSAMXG00000004711
Astyanax mexicanus
ENSAMXG00000004711
I
0.828
atf7b
Tetraodon nigroviridis
ENSTNIG00000014570
I
0.828
ENSPSIG00000005177
Pelodiscus sinensis
ENSPSIG00000005177
I
0.828
ENSGALG00000003038
Gallus gallus
ENSGALG00000003038
I
0.828
ENSACAG00000001199
Anolis carolinensis
ENSACAG00000001199
I
0.816
ENSLOCG00000006882
Lepisosteus oculatus
ENSLOCG00000006882
I
0.816
atf7b
Gasterosteus aculeatus
ENSGACG00000000679
I
0.816
ATF2
Homo sapiens
ENSG00000115966
D
0.810
ENSPFOG00000012991
Poecilia formosa
ENSPFOG00000012991
I
0.805
atf7b
Takifugu rubripes
ENSTRUG00000007560
I
0.805
ENSXMAG00000010537
Xiphophorus maculatus
ENSXMAG00000010537
I
0.805
ENSONIG00000011905
Oreochromis niloticus
ENSONIG00000011905
I
0.793
atf7a
Takifugu rubripes
ENSTRUG00000015923
I
0.793
atf7a
Tetraodon nigroviridis
ENSTNIG00000015107
I
0.793
atf7a
Danio rerio
ENSDARG00000011298
I
0.793
atf7a
Oryzias latipes
ENSORLG00000006799
I
0.793
atf7a
Gasterosteus aculeatus
ENSGACG00000008417
I
0.782
ENSSSCG00000015972
Sus scrofa
ENSSSCG00000015972
N
0.779
Atf2
Mus musculus
ENSMUSG00000027104
D
0.779
atf2
Danio rerio
ENSDARG00000023903
I
0.779
ATF2
Callithrix jacchus
ENSCJAG00000008085
I
0.779
ENSMODG00000027443
Monodelphis domestica
ENSMODG00000027443
N
0.769
ENSMMUG00000022313
Macaca mulatta
ENSMMUG00000022313
I
0.769
ENSAMXG00000001508
Astyanax mexicanus
ENSAMXG00000001508
I
0.759
atf7b
Danio rerio
ENSDARG00000055481
I
0.759
ENSTRUG00000015448
Takifugu rubripes
ENSTRUG00000015448
I
0.759
creb5b
Tetraodon nigroviridis
ENSTNIG00000018431
I
0.759
HelroG137277
Helobdella robusta
HelroG137277
N
0.758
NEMVEDRAFT_v1g34679
Nematostella vectensis
NEMVEDRAFT_v1g34679
I
0.747
creb5b
Oryzias latipes
ENSORLG00000007509
I
0.736
Ocbimv22037954m.g
Octopus bimaculoides
Ocbimv22037954m.g
I
0.724
SMAR008245
Strigamia maritima
SMAR008245
I
0.701