CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
atf7a
(
Tetraodon nigroviridis
)
bZIP,C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
PF00096 (zf-C2H2)
IPR011616
IPR007087
ENSTNIG00000015107
T075535_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Atf7
M09499_2.00
Mus musculus
NNVTGACRTCAB
VTGAYGTCABNN
Misc
Heinz et al.(2010)
3T3L1-Atf7_GSE56872
0.920
0.920
ATF7
M02872_2.00
Homo sapiens
NDRTGACGTCATNN
NNATGACGTCAYHN
SELEX
Jolma et al.(2013)
ATF7_1
0.908
0.908
ATF7
M04382_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Yin et al.(2017)
ATF7_eDBD_HT-SELEX
0.908
0.908
ATF7
M04383_2.00
Homo sapiens
NRTKAYGTMATN
NATKACRTMAYN
SELEX
Yin et al.(2017)
ATF7_eDBD_Methyl-HT-SELEX
0.908
0.908
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000018162
C2H2 ZF
7
31
FVCSAPGCGQRFTNEDHLAVHKHKH
ENSTNIP00000018162
bZIP
330
393
DPDERRQRFLERNRAAASRCRQKRKLWVFSLEKKAEELGTLNISLSNEVSLLRNEVAHLKQLLL
Links
Other
bZIP,C2H2 ZF
family TFs
Other
Tetraodon nigroviridis
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
atf7a
Takifugu rubripes
ENSTRUG00000015923
I
1.000
ENSONIG00000011905
Oreochromis niloticus
ENSONIG00000011905
I
0.954
atf7a
Oryzias latipes
ENSORLG00000006799
I
0.954
ENSPFOG00000012991
Poecilia formosa
ENSPFOG00000012991
I
0.943
atf7a
Gasterosteus aculeatus
ENSGACG00000008417
I
0.943
ENSXMAG00000010537
Xiphophorus maculatus
ENSXMAG00000010537
I
0.943
ENSLOCG00000006882
Lepisosteus oculatus
ENSLOCG00000006882
I
0.931
Gm28047
Mus musculus
ENSMUSG00000052414
I
0.920
ENSGALG00000003038
Gallus gallus
ENSGALG00000003038
I
0.920
Atf7
Mus musculus
ENSMUSG00000099083
D
0.920
ENSPSIG00000005177
Pelodiscus sinensis
ENSPSIG00000005177
I
0.920
Atf7
Rattus norvegicus
ENSRNOG00000015269
I
0.920
ENSTBEG00000014854
Tupaia belangeri
ENSTBEG00000014854
I
0.908
ENSSTOG00000006788
Ictidomys tridecemlineatus
ENSSTOG00000006788
I
0.908
ENSTTRG00000017181
Tursiops truncatus
ENSTTRG00000017181
I
0.908
ENSMICG00000011677
Microcebus murinus
ENSMICG00000011677
I
0.908
ENSMEUG00000001927
Macropus eugenii
ENSMEUG00000001927
I
0.908
ENSOCUG00000005707
Oryctolagus cuniculus
ENSOCUG00000005707
I
0.908
ENSP00000329212
Macaca fascicularis
ENSP00000329212
I
0.908
ENSOGAG00000001748
Otolemur garnettii
ENSOGAG00000001748
I
0.908
ENSPCAG00000005455
Procavia capensis
ENSPCAG00000005455
I
0.908
ENSPVAG00000012289
Pteropus vampyrus
ENSPVAG00000012289
I
0.908
ENSSARG00000001019
Sorex araneus
ENSSARG00000001019
I
0.908
ENSOPRG00000011431
Ochotona princeps
ENSOPRG00000011431
I
0.908
ENSSSCG00000000278
Sus scrofa
ENSSSCG00000000278
I
0.908
ATF7
Pan troglodytes
ENSPTRG00000005022
I
0.908
ENSNLEG00000017688
Nomascus leucogenys
ENSNLEG00000017688
I
0.908
ENSCHOG00000010269
Choloepus hoffmanni
ENSCHOG00000010269
I
0.908
ENSCJAG00000018699
Callithrix jacchus
ENSCJAG00000018699
I
0.908
ENSCPOG00000000973
Cavia porcellus
ENSCPOG00000000973
I
0.908
ENSCSAG00000005473
Chlorocebus sabaeus
ENSCSAG00000005473
I
0.908
ENSLAFG00000002626
Loxodonta africana
ENSLAFG00000002626
I
0.908
ENSBTAG00000005863
Bos taurus
ENSBTAG00000005863
I
0.908
ENSOARG00000016413
Ovis aries
ENSOARG00000016413
I
0.908
ENSACAG00000001199
Anolis carolinensis
ENSACAG00000001199
I
0.908
ENSAMEG00000012625
Ailuropoda melanoleuca
ENSAMEG00000012625
I
0.908
ENSAMXG00000004711
Astyanax mexicanus
ENSAMXG00000004711
I
0.908
atf7a
Danio rerio
ENSDARG00000011298
I
0.908
ENSCAFG00000006726
Canis familiaris
ENSCAFG00000006726
I
0.908
ENSETEG00000002463
Echinops telfairi
ENSETEG00000002463
I
0.908
AC023509.3
Homo sapiens
ENSG00000267281
I
0.908
ATF7
Gorilla gorilla
ENSGGOG00000015195
I
0.908
ENSDNOG00000008735
Dasypus novemcinctus
ENSDNOG00000008735
I
0.908
ATF7
Homo sapiens
ENSG00000170653
D
0.908
atf7
Xenopus tropicalis
XB-GENE-1216213
I
0.897
ENSPFOG00000009541
Poecilia formosa
ENSPFOG00000009541
I
0.885
ENSXMAG00000002160
Xiphophorus maculatus
ENSXMAG00000002160
I
0.885
atf7b
Tetraodon nigroviridis
ENSTNIG00000014570
I
0.874
atf7b
Gasterosteus aculeatus
ENSGACG00000000679
I
0.874
atf7b
Takifugu rubripes
ENSTRUG00000007560
I
0.851
ENSLACG00000004713
Latimeria chalumnae
ENSLACG00000004713
I
0.839
ENSLOCG00000007222
Lepisosteus oculatus
ENSLOCG00000007222
I
0.828
ENSXMAG00000000397
Xiphophorus maculatus
ENSXMAG00000000397
I
0.828
XP_002935730
Xenopus tropicalis
XP_002935730
I
0.828
ENSPFOG00000013792
Poecilia formosa
ENSPFOG00000013792
I
0.828
atf7b
Danio rerio
ENSDARG00000055481
I
0.805
atf2
Takifugu rubripes
ENSTRUG00000017553
I
0.805
ENSAMXG00000001508
Astyanax mexicanus
ENSAMXG00000001508
I
0.805
atf2
Tetraodon nigroviridis
ENSTNIG00000016954
I
0.802
atf2
Gasterosteus aculeatus
ENSGACG00000004600
I
0.793
atf2.S
Xenopus laevis
XB-GENE-6078170
I
0.782
creb5b
Tetraodon nigroviridis
ENSTNIG00000018431
I
0.736
Ocbimv22037954m.g
Octopus bimaculoides
Ocbimv22037954m.g
I
0.736
ENSTRUG00000015448
Takifugu rubripes
ENSTRUG00000015448
I
0.736
creb5b
Oryzias latipes
ENSORLG00000007509
I
0.713
NEMVEDRAFT_v1g34679
Nematostella vectensis
NEMVEDRAFT_v1g34679
I
0.701