CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOC_0001055101
(
Angiostrongylus costaricensis
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
ACOC_0001055101
T076351_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOC_0001055101-mRNA-1
Homeodomain
138
194
KRARTRITDDQLKILRQYFDINNSPSEAQVKEMSLKAGLPEKVIKHWFRNTLFKERQ
ACOC_0001055101-mRNA-1
Homeodomain
289
345
RANRTRFTDYQLRTLQQFFDKQAYPKDDDLEVLSKKLQLSPRVIVVWFQNARQKARK
ACOC_0001055101-mRNA-1
C2H2 ZF
367
388
FQCKRCNLVFQRYYELIQHQQK
ACOC_0001055101-mRNA-1
C2H2 ZF
466
487
KRCPFCGLLFRSKSSLQEHIPA
ACOC_0001055101-mRNA-1
Homeodomain
578
634
KRYRTHLTPTQVHVMKSVFGDYKTPSMTECEALGREIGLHKRVVQVWFQNARAKERK
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Angiostrongylus costaricensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_04497
Ancylostoma ceylanicum
ANCCEY_04497
N
0.882
ANCCAN_02499
Ancylostoma caninum
ANCCAN_02499
N
0.881
HPBE_0000677101
Heligmosomoides bakeri
HPBE_0000677101
N
0.876
scaffold58-EXSNAP2012.10
Pristionchus exspectatus
scaffold58-EXSNAP2012.10
N
0.762
SVE_1664000
Strongyloides venezuelensis
SVE_1664000
N
0.756
RSKR_0000341000
Rhabditophanes kr3021
RSKR_0000341000
N
0.728