CBN06681 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN06681 T082996_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.756 0.725
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN06681 C2H2 ZF 48 70
CBN06681 C2H2 ZF 76 98
CBN06681 C2H2 ZF 104 126

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RSKR_0000546900 Rhabditophanes kr3021 RSKR_0000546900 N 0.791
DME_0000351801 Dracunculus medinensis DME_0000351801 I 0.785
DICVIV_07054 Dictyocaulus viviparus DICVIV_07054 I 0.781
HCOI00724700 Haemonchus contortus HCOI00724700 I 0.781
HPBE_0002592101 Heligmosomoides bakeri HPBE_0002592101 I 0.781
NECAME_01009 Necator americanus NECAME_01009 I 0.781
ACOC_0000922301 Angiostrongylus costaricensis ACOC_0000922301 I 0.781
HCOI02146700 Haemonchus contortus HCOI02146700 I 0.781
HPLM_0001991801 Haemonchus placei HPLM_0001991801 I 0.781
TELCIR_11883 Teladorsagia circumcincta TELCIR_11883 I 0.781
ACAC_0001110701 Angiostrongylus cantonensis ACAC_0001110701 I 0.781
SVUK_0001722901 Strongylus vulgaris SVUK_0001722901 I 0.781
MhA1_Contig334.frz3.gene6 Meloidogyne hapla MhA1_Contig334.frz3.gene6 I 0.779
L893_g11389 Steinernema glaseri L893_g11389 I 0.769
BXY_1109100 Bursaphelenchus xylophilus BXY_1109100 N 0.768
L898_g24033 Steinernema monticolum L898_g24033 I 0.765
L898_g10136 Steinernema monticolum L898_g10136 I 0.765
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.765
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.765
scaffold451-EXSNAP2012.20 Pristionchus exspectatus scaffold451-EXSNAP2012.20 I 0.765
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.765
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.765
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.765
L892_g2739 Steinernema scapterisci L892_g2739 I 0.765
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.765
LOAG_03108 Loa loa LOAG_03108 I 0.765
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.765
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.765
L893_g11388 Steinernema glaseri L893_g11388 I 0.765
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.765
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.765
L889_g19596 Steinernema feltiae L889_g19596 I 0.765
Bm4236 Brugia malayi Bm4236 I 0.765
ASU_12247 Ascaris suum ASU_12247 I 0.765
CBN25393 Caenorhabditis brenneri CBN25393 I 0.760
L898_g9710 Steinernema monticolum L898_g9710 I 0.759
scaffold825-EXSNAP2012.3 Pristionchus exspectatus scaffold825-EXSNAP2012.3 N 0.756
L596_g623 Steinernema carpocapsae L596_g623 I 0.756
CBG14093 Caenorhabditis briggsae CBG14093 I 0.756
CRE00458 Caenorhabditis remanei CRE00458 I 0.756
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.756