CBN25393 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN25393 T083069_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lsy-2
M00615_2.00 		Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN		 PBM
Narasimhan et al.(2015)
pTH10810 		0.823 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN25393 C2H2 ZF 291 313
CBN25393 C2H2 ZF 319 341
CBN25393 C2H2 ZF 347 369

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
lsy-2 Caenorhabditis elegans WBGene00003087 D 0.823
CBG14093 Caenorhabditis briggsae CBG14093 I 0.823
CRE00458 Caenorhabditis remanei CRE00458 I 0.823
CJA18701 Caenorhabditis japonica CJA18701 I 0.819
SMUV_0000188601 Syphacia muris SMUV_0000188601 I 0.801
EVEC_0000258101 Enterobius vermicularis EVEC_0000258101 I 0.801
L596_g623 Steinernema carpocapsae L596_g623 I 0.791
L898_g10136 Steinernema monticolum L898_g10136 I 0.777
L893_g11388 Steinernema glaseri L893_g11388 I 0.777
L892_g2739 Steinernema scapterisci L892_g2739 I 0.777
L889_g19596 Steinernema feltiae L889_g19596 I 0.777
nAv.1.0.1.g08633 Acanthocheilonema viteae nAv.1.0.1.g08633 I 0.777
OFLC_0001560101 Onchocerca flexuosa OFLC_0001560101 I 0.777
scaffold451-EXSNAP2012.20 Pristionchus exspectatus scaffold451-EXSNAP2012.20 I 0.777
TCNE_0000759901 Toxocara canis TCNE_0000759901 I 0.777
RSKR_0000755800 Rhabditophanes kr3021 RSKR_0000755800 I 0.777
Bm4236 Brugia malayi Bm4236 I 0.777
nLs.2.1.2.g05842 Litomosoides sigmodontis nLs.2.1.2.g05842 I 0.777
nOo.2.0.1.g05859 Onchocerca ochengi nOo.2.0.1.g05859 I 0.777
nDi.2.2.2.g06219 Dirofilaria immitis nDi.2.2.2.g06219 I 0.777
L596_g16162 Steinernema carpocapsae L596_g16162 I 0.777
ASU_12247 Ascaris suum ASU_12247 I 0.777
WBGene00238990 Onchocerca volvulus WBGene00238990 I 0.777
LOAG_03108 Loa loa LOAG_03108 I 0.777
EEL_0000737301 Elaeophora elaphi EEL_0000737301 I 0.777
ASIM_0001293301 Anisakis simplex ASIM_0001293301 I 0.777
L898_g24033 Steinernema monticolum L898_g24033 I 0.773
CBG03853 Caenorhabditis briggsae CBG03853 I 0.771
L898_g9710 Steinernema monticolum L898_g9710 I 0.770
DME_0000351801 Dracunculus medinensis DME_0000351801 I 0.765
SSTP_0001164000 Strongyloides stercoralis SSTP_0001164000 I 0.764
PTRK_0001062600 Parastrongyloides trichosuri PTRK_0001062600 I 0.764
CRE08255 Caenorhabditis remanei CRE08255 I 0.764
HPBE_0002592101 Heligmosomoides bakeri HPBE_0002592101 I 0.761
SVUK_0001722901 Strongylus vulgaris SVUK_0001722901 I 0.761
TELCIR_11883 Teladorsagia circumcincta TELCIR_11883 I 0.761
HCOI02146700 Haemonchus contortus HCOI02146700 I 0.761
ACOC_0000922301 Angiostrongylus costaricensis ACOC_0000922301 I 0.761
HCOI00724700 Haemonchus contortus HCOI00724700 I 0.761
ACAC_0001110701 Angiostrongylus cantonensis ACAC_0001110701 I 0.761
HPLM_0001991801 Haemonchus placei HPLM_0001991801 I 0.761
NECAME_01009 Necator americanus NECAME_01009 I 0.761
DICVIV_07054 Dictyocaulus viviparus DICVIV_07054 I 0.761
CBN06681 Caenorhabditis brenneri CBN06681 I 0.760
L893_g11389 Steinernema glaseri L893_g11389 I 0.758
MhA1_Contig334.frz3.gene6 Meloidogyne hapla MhA1_Contig334.frz3.gene6 I 0.757