SNAI1 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000030111 T103778_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SNAI1
M04441_2.00
Homo sapiens
NVCACCTGYN

NRCAGGTGBN
SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX
0.825 0.989
SNAI1
M04443_2.00
Homo sapiens
TRCACCTGYN

NRCAGGTGYA
SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX
0.825 0.989
SNAI1
M08303_2.00
Homo sapiens
NNNNGCACCTGCYNB

VNRGCAGGTGCNNNN
ChIP-seq
Schmitges et al.(2016)
O95863.MEME
0.825 0.989
SNAI1
M08886_2.00
Homo sapiens
VCACCTGB

VCAGGTGB
Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C
0.825 0.989
SNAI1
M10201_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SNA_Q4
0.825 0.989
SNAI1
M10202_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SNA_Q6
0.825 0.989
SNAI1
M04442_2.00
Homo sapiens
NRCACCTGYN

NRCAGGTGYN
SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX
0.825 0.989
SNAI1
M04444_2.00
Homo sapiens
YRCACCTGYN

NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX
0.825 0.989
Snai1
M00781_2.00
Mus musculus
NNNTGTCANN

NNTGACANNN
PBM
Weirauch et al.(2013)
pTH2340
0.822 0.967
Snai1
M09002_2.00
Mus musculus
VCACCTGB

VCAGGTGB
Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C
0.822 0.967
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000018138 C2H2 ZF 154 176
ENSOGAP00000018138 C2H2 ZF 180 202
ENSOGAP00000018138 C2H2 ZF 208 230
ENSOGAP00000018138 C2H2 ZF 236 257

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_01715 Capronia coronata A1O1_01715 I 0.000
A1O3_08338 Capronia epimyces A1O3_08338 N 0.000
A1O5_11047 Cladophialophora psammophila A1O5_11047 N 0.000
A1O7_05233 Cladophialophora yegresii A1O7_05233 N 0.000
A1O9_12607 Exophiala aquamarina A1O9_12607 N 0.000
ACLA_027040 Aspergillus clavatus CADACLAG00002999 I 0.000
ACRE_005080 Acremonium chrysogenum ACRE_005080 I 0.000
ARB_04236 Arthroderma benhamiae ARB_04236 I 0.000
AUEXF2481DRAFT_1990 Aureobasidium subglaciale AUEXF2481DRAFT_1990 I 0.000
BBA_03162 Beauveria bassiana BBA_03162 I 0.000
Bcin02g02300 Botrytis cinerea Bcin02g02300 I 0.000
BDDG_09774 Blastomyces dermatitidis BDDG_09774 I 0.000
BGHDH14_bgh06823 Blumeria graminis BGHDH14_bgh06823 I 0.000
CADAFLAG00004136 Aspergillus flavus CADAFLAG00004136 I 0.000
CADANGAG00006293 Aspergillus niger CADANGAG00006293 I 0.000
CCM_04761 Cordyceps militaris CCM_04761 I 0.000
CFIO01_13406 Colletotrichum fioriniae CFIO01_13406 I 0.000
CGGC5_10716 Colletotrichum gloeosporioides CGGC5_10716 I 0.000
CH063_01246 Colletotrichum higginsianum CH063_01246 I 0.000
CHGG_10355 Chaetomium globosum CHGG_10355 I 0.000
CMQ_4895 Grosmannia clavigera CMQ_4895 I 0.000
Cob_07346 Colletotrichum orbiculare Cob_07346 I 0.000
CPUR_08385 Claviceps purpurea CPUR_08385 I 0.000
CSUB01_09077 Colletotrichum sublineola CSUB01_09077 I 0.000
CTHT_0008390 Chaetomium thermophilum CTHT_0008390 I 0.000
EPUS_06822 Endocarpon pusillum EPUS_06822 I 0.000
EURHEDRAFT_22412 Aspergillus ruber EURHEDRAFT_22412 I 0.000
EV44_g0919 Erysiphe necator EV44_g0919 I 0.000
F503_04373 Ophiostoma piceae uamh F503_04373 I 0.000
FFUJ_00821 Fusarium fujikuroi FFUJ_00821 I 0.000
fgenesh1_pg.sca_1_chr1_3_0000687 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000687 I 0.000
fgenesh3_pm.C_scaffold_10000323 Neurospora discreta fgenesh3_pm.C_scaffold_10000323 I 0.000
FGRRES_00318 Fusarium graminearum FGRRES_00318 I 0.000
FPSE_07692 Fusarium pseudograminearum FPSE_07692 I 0.000
G647_03448 Cladophialophora carrionii G647_03448 I 0.000
GLRG_07358 Colletotrichum graminicola GLRG_07358 I 0.000
GMDG_00077 Pseudogymnoascus destructans GMDG_00077 I 0.000
GSTUM_00009411001 Tuber melanosporum GSTUM_00009411001 N 0.000
gw1.2.720.1 Cryphonectria parasitica gw1.2.720.1 I 0.000
H101_04388 Trichophyton interdigitale H101_04388 I 0.000
H102_02726 Trichophyton rubrum H102_02726 I 0.000
H105_02744 Trichophyton soudanense H105_02744 I 0.000
HCBG_07944 Histoplasma capsulatum HCBG_07944 I 0.000
HMPREF1120_09254 Exophiala dermatitidis HMPREF1120_09254 N 0.000
HMPREF1624_03400 Sporothrix schenckii HMPREF1624_03400 I 0.000
M438DRAFT_283552 Aureobasidium pullulans M438DRAFT_283552 I 0.000
MAC_06559 Metarhizium acridum MAC_06559 I 0.000
MAJ_07299 Metarhizium majus MAJ_07299 I 0.000
MAM_00987 Metarhizium album MAM_00987 I 0.000
MANI_017733 Metarhizium anisopliae MANI_017733 I 0.000
MBM_02301 Marssonina brunnea MBM_02301 I 0.000
MBR_05142 Metarhizium brunneum MBR_05142 I 0.000
MCYG_05302 Arthroderma otae MCYG_05302 I 0.000
MCYG_05302 Microsporum canis MCYG_05302 I 0.000
MGG_15357 Magnaporthe oryzae MGG_15357 I 0.000
MGU_01530 Metarhizium guizhouense MGU_01530 I 0.000
MGYG_06353 Microsporum gypseum MGYG_06353 I 0.000
MYCTH_109046 Myceliophthora thermophila MYCTH_109046 I 0.000
NCU01706 Neurospora crassa NCU01706 D 0.000
NechaG75076 Fusarium solani NechaG75076 I 0.000
NEUTE1DRAFT_101778 Neurospora tetrasperma NEUTE1DRAFT_101778 I 0.000
OCS_06093 Ophiocordyceps sinensis OCS_06093 I 0.000
PABG_05363 Paracoccidioides brasiliensis PABG_05363 N 0.000
Pc12g05270 Penicillium chrysogenum Pc12g05270 I 0.000
PCH_Pc12g05270 Penicillium rubens PCH_Pc12g05270 I 0.000
PDE_02360 Penicillium oxalicum PDE_02360 I 0.000
PDIP_34590 Penicillium digitatum PDIP_34590 I 0.000
PEX1_091250 Penicillium expansum PEX1_091250 I 0.000
PITC_075220 Penicillium italicum PITC_075220 I 0.000
PMAA_096140 Penicillium marneffei PMAA_096140 I 0.000
PMAA_096140 Talaromyces marneffei PMAA_096140 I 0.000
PV04_03970 Capronia semiimmersa PV04_03970 N 0.000
PV05_06707 Exophiala xenobiotica PV05_06707 N 0.000
PV10_03876 Exophiala mesophila PV10_03876 I 0.000
PVAR5_6000 Byssochlamys spectabilis PVAR5_6000 I 0.000
S40285_03377 Stachybotrys chlorohalonata S40285_03377 I 0.000
S40288_05289 Stachybotrys chartarum S40288_05289 I 0.000
SPBR_01773 Sporothrix brasiliensis SPBR_01773 I 0.000
SS1G_01859 Sclerotinia sclerotiorum SS1G_01859 I 0.000
TEQG_06211 Trichophyton equinum TEQG_06211 I 0.000
TESG_03699 Trichophyton tonsurans TESG_03699 I 0.000
TRIATDRAFT_289913 Trichoderma atroviride TRIATDRAFT_289913 I 0.000
TRV_05271 Trichophyton verrucosum TRV_05271 I 0.000
TSTA_045180 Talaromyces stipitatus TSTA_045180 I 0.000
TSTA_106970 Talaromyces stipitatus TSTA_106970 I 0.000
U727_0043108001 Penicillium solitum U727_0043108001 I 0.000
UCREL1_549 Eutypa lata UCREL1_549 I 0.000
UV8b_756 Ustilaginoidea virens UV8b_756 I 0.000
VDAG_06776 Verticillium dahliae VDAG_06776 I 0.000
X797_006944 Metarhizium robertsii X797_006944 I 0.000
Z519_06848 Cladophialophora bantiana Z519_06848 I 0.000