bcl11aa (Oryzias latipes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSORLG00000001704 T104722_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH

DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.803 0.939
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN

NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.803 0.939
BCL11A
M10187_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.803 0.939
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC

GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.799 0.930
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC

GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.799 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000002119 C2H2 ZF 441 463
ENSORLP00000002119 C2H2 ZF 469 491
ENSORLP00000002119 C2H2 ZF 794 816
ENSORLP00000002119 C2H2 ZF 822 844
ENSORLP00000002119 C2H2 ZF 852 875
ENSORLP00000002120 C2H2 ZF 243 265
ENSORLP00000002120 C2H2 ZF 271 293
ENSORLP00000002120 C2H2 ZF 602 624
ENSORLP00000002120 C2H2 ZF 630 652
ENSORLP00000002120 C2H2 ZF 660 683

Links

Other C2H2 ZF family TFs
Other Oryzias latipes TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R000616 Calypte anna Aan_R000616 I 0.799
Aan_R006276 Calypte anna Aan_R006276 I 0.803
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.799
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.803
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.803
BCL11A Homo sapiens ENSG00000119866 D 0.803
BCL11A Felis catus ENSFCAG00000027154 I 0.803
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.803
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.803
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.803
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.803
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.803
BCL11A Sus scrofa ENSSSCG00000008392 I 0.803
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.803
BCL11A Microcebus murinus ENSMICG00000015052 I 0.803
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.803
Bcl11a Mus musculus ENSMUSG00000000861 I 0.803
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.805
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.803
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.803
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.803
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.803
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.803
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.803
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.803
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.803
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.803
bcl11aa Takifugu rubripes ENSTRUG00000003815 I 0.822
bcl11aa Danio rerio ENSDARG00000061352 I 0.816
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I 0.823
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I 0.813
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.816
bcl11ab Danio rerio ENSDARG00000063153 I 0.816
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.816
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.816
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.799
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.799
Bcl11b Mus musculus ENSMUSG00000048251 I 0.799
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.799
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.794
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.799
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.799
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.799
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.799
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.799
BCL11B Canis familiaris ENSCAFG00000017809 I 0.799
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.799
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.799
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.799
BCL11B Homo sapiens ENSG00000127152 D 0.799
BCL11B Sus scrofa ENSSSCG00000002507 I 0.799
BCL11B Bos taurus ENSBTAG00000018019 I 0.799
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.799
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.794
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.794
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.794
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.792
BGLB012676 Biomphalaria glabrata BGLB012676 I 0.762
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.803
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.799
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.799
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I 0.803
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I 0.813
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.799
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.799
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.799
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.803
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.803
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.799
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.799
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.803
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.803
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.799
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.799
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.792
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.811
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.805
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.794
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.813
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.803
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.803
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.799
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.795
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.802
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I 0.827
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.794
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.816
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.803
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.796
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.799
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.799
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.792
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.816
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I 0.827
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.799
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.799
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.803
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.799
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.803
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.803
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.799
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.803
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I 0.825
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.799
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.792
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.799
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.803
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I 0.799
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.801
im:7142702 Danio rerio ENSDARG00000067727 I 0.799
im:7142702 Tetraodon nigroviridis ENSTNIG00000009693 I 0.789
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.802
ISCW016418 Ixodes scapularis ISCW016418 I 0.769
L798_02171 Zootermopsis nevadensis L798_02171 I 0.759
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.781
PHUM606430 Pediculus humanus PHUM606430 I 0.759
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.799
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.803
RPRC001562 Rhodnius prolixus RPRC001562 I 0.757
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I 0.801
SMAR003355 Strigamia maritima SMAR003355 I 0.781
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.801