ZFX (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000002534 T108479_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZFX
M08850_2.00
Homo sapiens
YBVGGCCTVS

SBAGGCCBVR
Misc
Kulakovskiy et al.(2013)
ZFX_HUMAN.H11MO.0.A
0.809 0.993
ZFX
M10098_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFX_01
0.809 0.993
Zfx
M08100_2.00
Mus musculus
BBVRSCBVGGCCTV

BAGGCCBVGSYBVV
ChIP-seq
Mathelier et al.(2014)
MA0146.2
0.804 0.987
Zfx
M09017_2.00
Mus musculus
VVSVSBNBBAGGCCBVGSH

DSCBVGGCCTVVNVSBSBB
Misc
Kulakovskiy et al.(2013)
ZFX_MOUSE.H11MO.0.B
0.804 0.987
Zfx
M09517_2.00
Mus musculus
BNAGGCCT

AGGCCTNV
Misc
Heinz et al.(2010)
mES-Zfx_GSE11431
0.804 0.987
Zfx
M00788_2.00
Mus musculus
NRGGCCNNN

NNNGGCCYN
PBM
Weirauch et al.(2013)
pTH2933
0.803 0.983
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000002396 C2H2 ZF 416 438
ENSPVAP00000002396 C2H2 ZF 447 469
ENSPVAP00000002396 C2H2 ZF 479 501
ENSPVAP00000002396 C2H2 ZF 510 533
ENSPVAP00000002396 C2H2 ZF 539 561
ENSPVAP00000002396 C2H2 ZF 567 590
ENSPVAP00000002396 C2H2 ZF 596 618
ENSPVAP00000002396 C2H2 ZF 624 647
ENSPVAP00000002396 C2H2 ZF 653 675
ENSPVAP00000002396 C2H2 ZF 681 704
ENSPVAP00000002396 C2H2 ZF 710 732
ENSPVAP00000002396 C2H2 ZF 738 761
ENSPVAP00000002396 C2H2 ZF 767 790

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_10636 Cicer arietinum Ca_10636 N 0.000
chr2.CM0803.380.nc Lotus japonicus chr2.CM0803.380.nc N 0.000
Eucgr.E01205 Eucalyptus grandis Eucgr.E01205 N 0.000
gene27722-v1.0-hybrid Fragaria vesca gene27722-v1.0-hybrid N 0.000
GLYMA01G35370 Glycine max GLYMA01G35370 N 0.000
Gorai.004G174900 Gossypium raimondii Gorai.004G174900 N 0.000
GSMUA_Achr7G04840_001 Musa acuminata GSMUA_Achr7G04840_001 N 0.000
MTR_5g026540 Medicago truncatula MTR_5g026540 N 0.000
VIT_02s0087g00140 Vitis vinifera VIT_02s0087g00140 N 0.000
VIT_08s0105g00400 Vitis vinifera VIT_08s0105g00400 N 0.000