CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF454
(
Pteropus vampyrus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPVAG00000007676
T108604_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.827
0.989
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.827
0.989
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.827
0.989
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT
AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.827
0.989
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.827
0.989
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.827
0.989
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.827
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000007249
C2H2 ZF
168
190
FECSECGKVFTKSSTLNKHQKIH
ENSPVAP00000007249
C2H2 ZF
207
229
YECRECGKAFHQSTHLIHHQRIH
ENSPVAP00000007249
C2H2 ZF
235
257
YECKECGKAFSVSSSLTYHQKIH
ENSPVAP00000007249
C2H2 ZF
263
285
FECNLCGKAFIRNIHLAHHHRIH
ENSPVAP00000007249
C2H2 ZF
291
313
FKCNICDKAFVCRAHLTKHQNIH
ENSPVAP00000007249
C2H2 ZF
319
341
YKCNECGKAFNQSTSFLQHQRIH
ENSPVAP00000007249
C2H2 ZF
347
369
FECNECGKAFRVNSSLTEHQRIH
ENSPVAP00000007249
C2H2 ZF
375
397
YKCNECGKAFRDNSSFARHRKIH
ENSPVAP00000007249
C2H2 ZF
403
425
YRCGLCEKAFRDQSALAQHQRIH
ENSPVAP00000007249
C2H2 ZF
431
453
YTCNICEKAFSDHSALTQHKRIH
ENSPVAP00000007249
C2H2 ZF
459
481
YKCKICGKAFIRSTHLTQHQRIH
ENSPVAP00000007249
C2H2 ZF
487
509
YKCNKCGKAFNQTANLIQHQRHH
Links
Other
C2H2 ZF
family TFs
Other
Pteropus vampyrus
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy