ZNF454 (Pteropus vampyrus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPVAG00000007676 T108604_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF454
M04571_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1
0.827 0.989
ZNF454
M04572_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2
0.827 0.989
ZNF454
M08346_2.00
Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB

VAAWGGCHCHNGGCCCYKRNDGNYBBM
ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE
0.827 0.989
ZNF454
M08256_2.00
Homo sapiens
GWGCYTT

AARGCWC
ChIP-seq
Najafabadi et al.(2015b)
ZNF454
0.827 0.989
ZNF454
M07651_2.00
Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB

VRMNGGCTCBVGGBCCYGRBRGDYBBMYG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping
0.827 0.989
ZNF454
M04573_2.00
Homo sapiens
WRGCGCCWGGCGCYW

WRGCGCCWGGCGCYW
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1
0.827 0.989
ZNF454
M04574_2.00
Homo sapiens
TRGCGCCGGCGCYN

NRGCGCCGGCGCYA
SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2
0.827 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000007249 C2H2 ZF 168 190
ENSPVAP00000007249 C2H2 ZF 207 229
ENSPVAP00000007249 C2H2 ZF 235 257
ENSPVAP00000007249 C2H2 ZF 263 285
ENSPVAP00000007249 C2H2 ZF 291 313
ENSPVAP00000007249 C2H2 ZF 319 341
ENSPVAP00000007249 C2H2 ZF 347 369
ENSPVAP00000007249 C2H2 ZF 375 397
ENSPVAP00000007249 C2H2 ZF 403 425
ENSPVAP00000007249 C2H2 ZF 431 453
ENSPVAP00000007249 C2H2 ZF 459 481
ENSPVAP00000007249 C2H2 ZF 487 509

Links

Other C2H2 ZF family TFs
Other Pteropus vampyrus TFs

Invalid Input OrderBy

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action